2004
DOI: 10.4049/jimmunol.173.10.6109
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A General Survey of Thymocyte Differentiation by Transcriptional Analysis of Knockout Mouse Models

Abstract: The thymus is the primary site of T cell lymphopoiesis. To undergo proper differentiation, developing T cells follow a well-ordered genetic program that strictly depends on the heterogeneous and highly specialized thymic microenvironment. In this study, we used microarray technology to extensively describe transcriptional events regulating αβ T cell fate. To get an integrated view of these processes, both whole thymi from genetically engineered mice together with purified thymocytes were analyzed. Using mice e… Show more

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Cited by 27 publications
(38 citation statements)
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“…Ϫ cells have a lower threshold for ligand-independent pre-TCR signaling, based in part on increased Ca 2ϩ capacitive entry (20,45). This is significant, considering that such Ca 2ϩ flux-mediated signaling normally represses full-length p51-Ets1, but not p42-Ets1, transcriptional activity.…”
Section: Cd8mentioning
confidence: 96%
“…Ϫ cells have a lower threshold for ligand-independent pre-TCR signaling, based in part on increased Ca 2ϩ capacitive entry (20,45). This is significant, considering that such Ca 2ϩ flux-mediated signaling normally represses full-length p51-Ets1, but not p42-Ets1, transcriptional activity.…”
Section: Cd8mentioning
confidence: 96%
“…on April 27, 2019. by guest www.bloodjournal.org From and subtracted as described. 27 For each sample, the 6000 highest values were flagged.…”
Section: Data Processing and Analysismentioning
confidence: 99%
“…For each array, background intensity was calculated on the basis of the average of the 400 lowest values and subtracted as described. 27 For each sample, the 6000 highest values were flagged.…”
Section: Data Processing and Analysismentioning
confidence: 99%
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“…The nylon microarrays used for this study were produced as described (29) using the same bacterial clones except that 289 of them were replaced by IMAGE clones (Deutsches Ressourcenzentrum für Genomforschung Resource Centre, Berlin, Germany) representing mostly cytokines, their receptors and CD8 T cell-expressed genes. The final clone set includes 8668 bacterial clones representing 7750 nonredundant Unigene clusters.…”
Section: Gene Expression Profilingmentioning
confidence: 99%