Abstract:CRISPR-Cas allows us to introduce desired genome editing, including mutations, epitopes, and deletions, with unprecedented efficiency. The development of CRISPR-Cas has progressed to such an extent that it is now applicable in various fields, with the help of model organisms. C. elegans is one of the pioneering animals in which numerous CRISPR-Cas strategies have been rapidly established over the past decade. Ironically, the emergence of numerous methods makes the choice of the correct method difficult. Choosi… Show more
“…Various genetic models, such as zebrafish, Caenorhabditis elegans, and Drosophila, also benefits from CRISPR's technology and genome modification. It is worthwhile to mention that different studies have reported hereditary germinal modification, the introduction of high efficiency of specific mutations, and transgenic, tissue-specific editing in flies (33)(34)(35)(36)(37)(38), fish (39)(40)(41)(42)(43)(44)(45), and worms (46)(47)(48)(49)(50)(51)(52)(53)(54)(55)(56).…”
Section: Crispr-cas9 and Lower Organismsmentioning
CRISPR is an extraordinarily powerful technique regulating any target gene across the genome with promising therapy intentions. CRISPR-Cas9 is a convenient tool for gene manipulation. Notwithstanding this, the broad consequence of human gene editing, particularly germinal genes, cannot be predicted. Firstly, once edited, the genes would be part of the human population for successive generations and may be impossible to remove from humanity; secondly, success is not guaranteed; thirdly, the fidelity of editing, as it could affect unrelated genes or unspecified segments of DNA; and last but not least, its influence on gene interaction, network, and signaling pathways could be difficult to be predicted. CRISPR-Cas9 mostly includes precise genome editing, rapidity and cost-effectiveness, creation of disease models, study of gene function, applications in gene therapy and translation research and wide diversity for species. The technique also ignited the moral and ethical concerns of scientific community. Ethics and safety approval for gene modification in human cells is required by the National Institutes of Health (NIH). The NIH does not currently fund studies of CRISPR in human embryos and opposes the CRISPR utilization in germline cells because these alterations would be permanent and heritable. The technology has promised with the most profound implications for cancer therapy. Recent advances in CRISPR-based technology is redefining how cancer is studied and potentially improves anti-cancer therapies. One way to improve the technology is to use machine-learning approaches to comprehending CRISPR errors and predicting more specific edits and repairing outcomes.
“…Various genetic models, such as zebrafish, Caenorhabditis elegans, and Drosophila, also benefits from CRISPR's technology and genome modification. It is worthwhile to mention that different studies have reported hereditary germinal modification, the introduction of high efficiency of specific mutations, and transgenic, tissue-specific editing in flies (33)(34)(35)(36)(37)(38), fish (39)(40)(41)(42)(43)(44)(45), and worms (46)(47)(48)(49)(50)(51)(52)(53)(54)(55)(56).…”
Section: Crispr-cas9 and Lower Organismsmentioning
CRISPR is an extraordinarily powerful technique regulating any target gene across the genome with promising therapy intentions. CRISPR-Cas9 is a convenient tool for gene manipulation. Notwithstanding this, the broad consequence of human gene editing, particularly germinal genes, cannot be predicted. Firstly, once edited, the genes would be part of the human population for successive generations and may be impossible to remove from humanity; secondly, success is not guaranteed; thirdly, the fidelity of editing, as it could affect unrelated genes or unspecified segments of DNA; and last but not least, its influence on gene interaction, network, and signaling pathways could be difficult to be predicted. CRISPR-Cas9 mostly includes precise genome editing, rapidity and cost-effectiveness, creation of disease models, study of gene function, applications in gene therapy and translation research and wide diversity for species. The technique also ignited the moral and ethical concerns of scientific community. Ethics and safety approval for gene modification in human cells is required by the National Institutes of Health (NIH). The NIH does not currently fund studies of CRISPR in human embryos and opposes the CRISPR utilization in germline cells because these alterations would be permanent and heritable. The technology has promised with the most profound implications for cancer therapy. Recent advances in CRISPR-based technology is redefining how cancer is studied and potentially improves anti-cancer therapies. One way to improve the technology is to use machine-learning approaches to comprehending CRISPR errors and predicting more specific edits and repairing outcomes.
“…The CRISPR-Cas9 system has been successfully adopted in various nematode species, including the classical model C. elegans, the necromenic nematode Pristionchus pacificus, the mammalian parasite Strongyloides stercoralis, and other non-model species, such as Aunema , Oscheius, and Panagrolaimus (Adams et al, 2019; Castelletto & Hallem, 2021; Dockendorff et al, 2022; Hellekes et al, 2023; Hiraga et al, 2021; H.-M. Kim et al, 2022; Lok, 2019). In these successful cases, either plasmid encoded Cas9 and guide RNAs or Cas9 RNP were delivered through microinjection into the gonad of a hermaphrodite or a female nematode.…”
Molecular tool development in traditionally non-tractable animals opens new avenues to study gene functions in the relevant ecological context. Entomopathogenic nematodes (EPN)Steinernemaand their symbiotic bacteria ofXenorhabdusspp are a valuable experimental system in the laboratory and are applicable in the field to promote agricultural productivity. The infective juvenile (IJ) stage of the nematode packages mutualistic symbiotic bacteria in the intestinal pocket and invades insects that are agricultural pests. The lack of consistent and heritable genetics tools in EPN targeted mutagenesis severely restricted the study of molecular mechanisms underlying both parasitic and mutualistic interactions. Here, I report a protocol for CRISPR-Cas9 based genome-editing that is successful in two EPN species,S. carpocapsaeandS. hermaphroditum. I adapted a gonadal microinjection technique inS. carpocapsae, which created on-target modifications of a homologueSc-dpy-10(cuticular collagen) by homology-directed repair. A similar delivery approach was used to introduce various alleles inS. hermaphroditumincludingSh-dpy-10andSh-unc-22(a muscle gene), resulting in visible and heritable phenotypes of dumpy and twitching, respectively. Using conditionally dominant alleles ofSh-unc-22as a co-CRISPR marker, I successfully modified a second locus encoding Sh-Daf-22 (a homologue of human sterol carrier protein SCPx), predicted to function as a core enzyme in the biosynthesis of nematode pheromone that is required for IJ development. As a proof of concept,Sh-daf-22null mutant showed IJ developmental defectsin vivo(in insecta). This research demonstrates thatSteinernemaspp are highly tractable for targeted mutagenesis and has great potential in the study of gene functions under controlled laboratory conditions within the relevant context of its ecological niche.
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