A comprehensive compilation of 400 nucleotide sequences coding for proteins from the yeast Saccharomyces cerevisiae = LISTA1

Mossé, Marie-Odile; Brouillet, Sophie; Risler, Jean‐Loup; Lazowska, Jaga; Słonimski, Piotr P.

doi:10.1007/bf00434077

Cited by 8 publications

(1 citation statement)

References 2 publications

Supporting

Mentioning

Contrasting

Order By: Relevance

“…In view of the very rapid growth of sequence data from genetic and biochemical experiments and systematic sequencing we continued to compile a list of coding sequences from yeast (1)(2)(3)(4). The database contains sequences from Saccharomyces cerevisiae, Saccharomyces carlsbergiensis and Saccharomyces uvarum, which are believed to constitute conspecific taxonomic species (5).…”

Section: Lista a Compilation Of Coding Sequencesmentioning

confidence: 99%

LISTA, LISTA-HOP and LISTA-HON: a comprehensive compilation of protein encoding sequences and its associated homology databases from the yeast Saccharomyces

Dölz¹,

Mossé

Słonimski

et al. 1994

Nucl Acids Res

View full text Add to dashboard Cite

We continued our effort to make a comprehensive database (LISTA) for the yeast Saccharomyces cerevisiae. In this database each sequence has been attributed a single genetic name. In the case of duplicated sequences a simple method has been applied to distinguish between sequences of one and the same gene from non-allelic sequences of duplicated genes. If necessary, synonyms are given in the case of allelic duplicated sequences. Thus sequences can be found either by the name or by synonyms given in LISTA. Each entry contains the genetic name, the mnemonic from the EMBL data bank, the codon bias, reference of the publication of the sequence, Chromosomal location as far as known, Swissprot and EMBL accession numbers. To obtain more information on the included sequences, each entry has been screened against non-redundant nucleotide and protein data bank collections resulting in LISTA-HON and LISTA-HOP. The LISTA data base can be linked to the associated data sets or to nucleotide and protein banks by the Sequence Retrieval System (SRS).

show abstract

Section: Lista a Compilation Of Coding Sequencesmentioning

confidence: 99%

LISTA, LISTA-HOP and LISTA-HON: a comprehensive compilation of protein encoding sequences and its associated homology databases from the yeast Saccharomyces

Dölz¹,

Mossé

Słonimski

et al. 1994

Nucl Acids Res

View full text Add to dashboard Cite

show abstract

Synonymous codon usage in Saccharomyces cerevisiae

Sharp

Cowe

1991

Yeast

257

155

View full text Add to dashboard Cite

Isolation and sequence of HSP30, a yeast heat-shock gene coding for a hydrophobic membrane protein

Régnacq¹,

Boucherie²

1993

Curr Genet

View full text Add to dashboard Cite

Using differential hybridization, a gene preferentially expressed during entry into stationary phase has been isolated. Subsequent analysis indicated that this gene corresponds to a heat-shock gene. The nucleotide sequence has been determined. It revealed a 332 amino-acid protein. No similarities to any previously known protein have been noted. The protein is very hydrophobic and is predicted to have a membraneous localisation. In agreement with this hypothesis, the analysis of membrane proteins from stationary-phase cells showed that a strain carrying this gene on a multicopy vector overproduces a protein of 30 kDa. This protein was recognized by antibodies directed against the N-terminal portion of the gene product. Considering its induction in response to heat shock and the apparent molecular weight of its product, this gene was designated HSP30.

show abstract

A comprehensive compilation of 400 nucleotide sequences coding for proteins from the yeast Saccharomyces cerevisiae = LISTA1

Cited by 8 publications

References 2 publications

LISTA, LISTA-HOP and LISTA-HON: a comprehensive compilation of protein encoding sequences and its associated homology databases from the yeast Saccharomyces

LISTA, LISTA-HOP and LISTA-HON: a comprehensive compilation of protein encoding sequences and its associated homology databases from the yeast Saccharomyces

Synonymous codon usage in Saccharomyces cerevisiae

Isolation and sequence of HSP30, a yeast heat-shock gene coding for a hydrophobic membrane protein

Contact Info

Product

Resources

About