Using
omics approaches to monitor complex environmental mixtures
is challenging. Previously, we evaluated in vitro transcriptomic effects of complex organic extracts derived from
avian eggs. However, there is a lack of studies using wild species
that are naturally exposed to contaminant mixtures. Here, we examined
polychlorinated biphenyl (PCB) and polybrominated diphenyl ether (PBDE)
residues and gene expression in embryonic liver tissue of double-crested
cormorants (Phalacrocorax auritus)
collected from six variably contaminated colonies. Colonies near industrialized
areas were distinguished from less contaminated sites based on their
PCB and PBDE concentrations. The most variably expressed genes between
sites were involved in pathways including, xenobiotic metabolism (e.g., Cyp1a4), lipid/bile acid homeostasis (e.g., Lbfabp), and oxidative stress (e.g., Mt4). Hierarchical
clustering, based on relative gene expression, revealed a grouping
pattern similar to chemical residue concentrations. Further, partial
least squares regression analysis was used to estimate chemical concentrations
from transcriptomics data. PCB 155 and BDE 47 showed the highest slopes
(0.77 and 0.69, respectively) fitted by linear regression of measured
and estimated chemical concentrations. The application of transcriptomics
to a wild avian species, naturally exposed to complex chemical mixtures
and other stressors, represents a promising means to distinguish and
prioritize variably contaminated sites.