An excellent introduction to the underlying biology is Barton et al. [2].
Chapter 2
Wright-Fisher and Moran models and the Kingman Coalescent
Pedigrees or Genealogies?For populations such as our own, in which individuals have two parents, the ancestry of an individual is determined by tracing parents, grandparents, great grandparents, and so on. Since populations are finite, ultimately there must be individuals that appear multiple times in this 'pedigree' and so we end up with a rather complicated branching and coalescing structure.To investigate this further, we consider an extremely simple model of reproduction.We're going to suppose that our population is hermaphrodite, so that we don't have to worry about distinguishing males and females. The basic conclusion would not change if we were to drop this assumption. 'Diploid' refers to the fact that each individual carries two copies of each chromosome. Definition 2.1.1 (Diploid Wright-Fisher model). Consider a large diploid (but for simplicity hermaphrodite) population of size N . Under the diploid Wright-Fisher model, the population evolves in discrete generations. In each generation, independently, each individual has two parents, chosen uniformly at random from the previous generation. This is illustrated in Figure 2.1. For this (rather small) population, after five generations, three individuals in the ancestral population are included in the pedigree of everyone in the current population.