Although pyruvate has not been considered as a fuel for an enzymatic biofuel cell, there are dehydrogenase enzyme capable of oxidizing pyruvate. This paper details the discovery of a pyrroloquinoline quinone-dependent pyruvate dehydrogenase (PQQ-PDH) in Gluconobacter species. A method was developed to isolate and purify PQQ-PDH from Gluconobacter, along with the characterization of the purified enzyme. It was found that the purified enzyme can undergo direct electron transfer at carbon electrodes surfaces, which allowed for its incorporation into a pyruvate biofuel cell. It was also found that PQQ-PDH lacks substrate specificity, which minimizes its usefulness in many sensor applications, but is advantageous for deep oxidation in biofuel cell anodes.