Modeling and Simulation in Engineering 2012
DOI: 10.5772/31157
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3D Modeling of a Natural Killer Receptor, Siglec-7: Critical Amino Acids for Glycan-Binding and Cell Death-Inducing Activity

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“…In addition to Siglec-7, human NK cells also express the closely related receptor Siglec-9, albeit at lower expression levels (Figure A). , We therefore wanted to check for a possible cross-reaction of our Siglec-7 inhibitor with Siglec-9. The two proteins have 76% similarities in their ligand binding domain and display different ligand preferences only based on a six amino acid sequence. , These amino acids form in part the Tyr-64 cavity, and one might therefore predict selectivity of our ligands toward Siglec-7. However, we still wanted to experimentally explore the affinity of 32 to Siglec-9, because such an interaction might cause functional effects even in absence of any impact on Siglec-7 .…”
Section: Results and Discussionmentioning
confidence: 99%
“…In addition to Siglec-7, human NK cells also express the closely related receptor Siglec-9, albeit at lower expression levels (Figure A). , We therefore wanted to check for a possible cross-reaction of our Siglec-7 inhibitor with Siglec-9. The two proteins have 76% similarities in their ligand binding domain and display different ligand preferences only based on a six amino acid sequence. , These amino acids form in part the Tyr-64 cavity, and one might therefore predict selectivity of our ligands toward Siglec-7. However, we still wanted to experimentally explore the affinity of 32 to Siglec-9, because such an interaction might cause functional effects even in absence of any impact on Siglec-7 .…”
Section: Results and Discussionmentioning
confidence: 99%