Abstract.A new mutant strain of Chlamydomonas, ptxl, has been identified which is defective in phototaxis. This strain swims with a rate and straightness of path comparable with that of wild-type cells, and retains the photoshock response. Thus, the mutation does not cause any gross defects in swimming ability or photoreception, and appears to be specific for phototaxis. Calcium is required for phototaxis in wildtype cells, and causes a concentration-dependent shift in flagellar dominance in reactivated, demembranated cell models, ptxl-reactivated models are defective in this calcium-dependent shift in flagellar dominance. This indicates that the mutation affects one or more components of the calcium-dependent axonemal regulatory system, and that this system mediates phototaxis. The reduction or absence of two 75-kD axonemal proteins correlates with the nonphototactic phenotype. Axonemal fractionation studies, and analysis of axonemes from mutant strains with known structural defects, failed to reveal the structural localization of the 75-kD proteins within the axoneme. The proteins are not components of the outer dynein arms, two of the three types of inner dynein arms, the radial spokes, or the central pair complex. Because changes in flagellar motility ultimately require the regulation of dynein activity, cell models from mutant strains defective in specific dynein arms were reactivated at various calcium concentrations. Mutants lacking the outer arms, or the I1 or I2 inner dynein arms, retain the wild-type calcium-dependent shift in flagellar dominance. Therefore, none of these arms are the sole mediators of phototaxis.T He unicellular biflagellate alga Chlamydomonas has been used extensively in the study of flagellar motility. This is due, in part, to the ease with which mutant strains displaying aberrant motility can be produced and analyzed. As a result, the structures which generate motility are well characterized, yet the processes which regulate motility remain obscure. To study the regulation of flagellar motility, we have generated mutant strains of Chlamydomonas which are defective in their ability to phototax.The two flagella of Chlamydomonas can be distinguished based on their position relative to a specialized region of the chloroplast referred to as the eyespot (13). During phototaxis, the beat pattern of the cis-flagellum (the flagellum closest to the eyespot) and the trans-flagelium are modified, resulting in a change in swimming direction relative to the light. This requires that the cis-and trans-flagella respond differentially to the signal generated by photoreception. Previous studies have provided evidence that calcium is required for phototaxis (3,4,22,25,37). Moreover, the two flagella are differentially responsive to calcium, such that the cis-flagellum is more effective at force generation at low calcium 00 -9 M), and the trans-flagellum more effective at higher calcium (10 -7 M) (17). This differential sensitivity of the cis-and trans-flagella to calcium has been proposed to mediate ...