2013
DOI: 10.1186/gm443
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Development and validation of a robust automated analysis of plasma phospholipid fatty acids for metabolic phenotyping of large epidemiological studies

Abstract: A fully automated, high-throughput method was developed to profile the fatty acids of phospholipids from human plasma samples for application to a large epidemiological sample set (n > 25,000). We report here on the data obtained for the quality-control materials used with the first 860 batches, and the validation process used. The method consists of two robotic systems combined with gas chromatography, performing lipid extraction, phospholipid isolation, hydrolysis and derivatization to fatty-acid methyl este… Show more

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Cited by 39 publications
(49 citation statements)
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“…20 : 4 n -6 + 20 : 3 n -3 co-eluted, but as 20 : 3 n -3 concentration in human samples is negligible, this peak was identified as 20 : 4 n -6 [43] a Values are given as means ± SEM b Overall effect of treatment based on change-from-baseline was calculated by mixed model analysis, with adjustments made for fixed effects of baseline values of the assessed variable, period, treatment, age, gender and BMI. Participant was included as a random effect…”
Section: Resultsmentioning
confidence: 99%
“…20 : 4 n -6 + 20 : 3 n -3 co-eluted, but as 20 : 3 n -3 concentration in human samples is negligible, this peak was identified as 20 : 4 n -6 [43] a Values are given as means ± SEM b Overall effect of treatment based on change-from-baseline was calculated by mixed model analysis, with adjustments made for fixed effects of baseline values of the assessed variable, period, treatment, age, gender and BMI. Participant was included as a random effect…”
Section: Resultsmentioning
confidence: 99%
“…Fatty acids were profiled at the Medical Research Council Human Nutrition Research (Cambridge, UK); profiling involved analysis of plasma samples stored at baseline at −196°C (or −150°C in Denmark)—a temperature at which fatty acids remain stable. 6 The assay methods have previously been described 23 and included hydrolysis and methylation to convert phospholipid fatty acids into more volatile fatty acid methyl esters and separation of the different fatty acids by gas chromatography (J&W HP-88, 30 m length, 0·25 mm internal diameter [Agilent Technologies, CA, USA]) equipped with flame ionisation detection (7890N GC [Agilent Technologies]). Samples from people with type 2 diabetes and subcohort participants were processed in random order by centre, and laboratory staff were masked to all participant characteristics by the use of anonymised aliquots.…”
Section: Methodsmentioning
confidence: 99%
“…We used human and equine plasma (Sera Laboratories International, West Sussex, UK) for quality control. 23 …”
Section: Methodsmentioning
confidence: 99%
“…Subfractionation of adipose tissue was performed as reported (33). Shotgun lipidomics were performed as described previously (26,34).…”
Section: Methodsmentioning
confidence: 99%