“…The reunion of two genomes in a single nucleus results in intergenomic conflicts, leading to genetic and epigenetic reorganizations (Riddle;Birchler, 2003). This has been evidenced in works carried out with natural and synthetic hybrids, which have demonstrated that the new genomic constitution, resulting from hybridization, leads to elimination of DNA sequences (Feldman et al, 1997;Shaked et al, 2001;Leitch;Bennett, 2004;Leão et al, 2011;Nunes et al, 2013), chromosome rearrangements (Pires et al, 2004;Pontes et al, 2004;Udall;Quijada;Osborn, 2005), chromosome elimination (Germand et al, 2005;Ishii et al, 2010;Sanei et al, 2011;Andrade-Vieira et al, 2013), epigenetic alterations such as methylation of coding and non-coding DNA sequences Feldman, 2004;Salmon;Ainouche;Wendel, 2005;Lukens et al, 2006), gene silencing (Lee;Chen, 2001;Doyle et al, 2008;Gaeta et al, 2007;) and activation of genes and retroelements that alter the expression of adjacent genes (Adams;Wendel, 2005;Feldman;Levy, 2002Levy, , 2003.…”