The genetic divergence caused by genetic drift and/or selection is suggested to affect the vectorial capacity and insecticide susceptibility of sand flies, as well as other arthropods.In the present study, cytochrome b (cyt b) gene sequences were determined in 13 species circulating in Peru to establish a basis for analysis of the genetic structure, and the intraspecific genetic diversity was assessed in the Lutzomyia Consequently, other characteristics like molecular markers have been explored for the development of reliable tools for species identification, as well as an understanding of intraspecific genetic diversity and population structure (Torgerson et al., 2003;Beati et al., 2004; Terayama et al., 2008; Kuwahara et al., 2009;Fujita et al., 2012). Although discrepancies between morphologic groupings and the phylogenetic relationships were occasionally found, ribosomal RNA (rRNA) genes were shown to be useful genetic markers for identifying sand flies at the species level (Beati et al., 2004; Terayama et al., 2008;Fujita et al., 2012). The rRNA internal transcribed spacer (ITS) 1 and ITS2 sequences were also analyzed in sand flies, and their utility for taxonomic purposes, but not for intraspecific analysis, was reported (Kuwahara et al., 2009;Hamarsheh et al., 2009;Belen et al., 2011;Florin et al., 2011).
5It has been suggested that genetic divergence caused by genetic drift and/or selection may affect the vectorial capacity and insecticide susceptibility of sand flies, as well as other arthropods (Lanzaro et al., 1993;Hassan et al., 2012). Maternally inherited mitochondrial genes reflect the evolutionary history more accurately because of their clonal inheritance, the lack of recombination and higher mutation rate compared with nuclear DNA (Avise, 1994;Rokas et al., 2003). Thus, mitochondrial genes have been used in population genetics and evolutionary study of vector species including phlebotomine sand flies, and several mitochondrial genes have been applied to estimate the population structure of sand fly species (Esseghir et al., 1997; Ishikawa et al., 1999; Hodgkinson et al., 2003;Hamarsheh et al., 2007;Belen et al., 2011;Florin et al., 2011;Rocha et al., 2011;Cohnstaedt et al., 2012). Of these, the 3'-end of the cytochrome b (cyt b) gene has proven to be a suitable marker to evaluate genetic structure in Lutzomyia (Lu.) whitmani (Ishikawa et al., 1999), Lu. longipalpis (Hodgkinson et al., 2003;Rocha et al., 2011) and Lu. verrucarum (Cohnstaedt et al., 2012). In the present study, cy t b gene sequences including the 5' region were determined in 13 sand fly species circulating in Peru to establish a basis for the analysis of population structure, and the intraspecific genetic diversity was assessed for Lu. peruensis, a main vector species of Leishmania (Viannia) peruviana in the Peruvian Andes (Perez et al., 1991(Perez et al., , 2007 Kato et al., 2008 Kato et al., , 2011. Ambar and Jalcan, Department of Lima) (Fig. 1) were subjected to haplotype analysis.The sand flies were fixed in 100...