Localised cutaneous leishmaniasis (LCL) is the most common form of cutaneous
leishmaniasis characterised by single or multiple painless chronic ulcers, which
commonly presents with secondary bacterial infection. Previous culture-based studies
have found staphylococci, streptococci, and opportunistic pathogenic bacteria in LCL
lesions, but there have been no comparisons to normal skin. In addition, this
approach has strong bias for determining bacterial composition. The present study
tested the hypothesis that bacterial communities in LCL lesions differ from those
found on healthy skin (HS). Using a high throughput amplicon sequencing approach,
which allows for better populational evaluation due to greater depth coverage and the
Quantitative Insights Into Microbial Ecology pipeline, we compared the
microbiological signature of LCL lesions with that of contralateral HS from the same
individuals.Streptococcus,
Staphylococcus,Fusobacterium and other strict or
facultative anaerobic bacteria composed the LCL microbiome. Aerobic and facultative
anaerobic bacteria found in HS, including environmental bacteria, were significantly
decreased in LCL lesions (p < 0.01). This paper presents the first comprehensive
microbiome identification from LCL lesions with next generation sequence methodology
and shows a marked reduction of bacterial diversity in the lesions.