There are some incidental findings during bariatric surgery. Some of these findings may make the operation more challenging than routine surgery. Intestinal malrotation/non‐rotation are rare congenital anomalies that may remain asymptomatic until bariatric surgery. Here we report a 30‐year‐old female patient with unknown intestinal congenital anomaly which was diagnosed during surgery and she underwent Roux‐en‐Y gastric bypass, which can be a challenging procedure in intestinal malrotation/non‐rotation and conversion may be needed.