A method is presented to determine the absolute hydration enthalpy of the proton, ∆H aq °[H + ], from a set of cluster-ion solvation data without the use of extra thermodynamic assumptions. The absolute proton hydration enthalpy has been found to be ∼50 kJ/mol different than traditional values and has been more precisely determined (by about an order of magnitude). Conventional ion solvation properties, based on the standard heat of formation of H + (aq) set to zero, have been devised that may be confusing to the uninitiated but are useful in thermochemical evaluations because they avoid the unnecessary introduction of the larger uncertainties in our knowledge of absolute values. In a similar strategy, we have motivated the need for a reassessment of ∆H aq °[H + ] by the trends with increased clustering in conventional cluster-ion solvation enthalpy differences for pairs of oppositely charged cluster ions. The consequences of particular preferred values for ∆H aq °[H + ] may be evaluated with regard to cluster-ion properties and how they connect to the bulk. While this approach defines the problem and is strongly suggestive of the currently determined proton value, it requires extra thermodynamic assumptions for a definitive determination. Instead, a unique reassessment has been accomplished without extra thermodynamic assumptions, based on the known fraction of bulk absolute solvation enthalpies obtained by pairs of oppositely charged cluster ions at particular cluster sizes. This approach, called the cluster-pair-based approximation for ∆H aq °[H + ], becomes exact for the idealized pair of ions that have obtained the same fraction of their bulk values at the same cluster size. The true value of ∆H aq °[H + ] is revealed by the linear deviations of real pairs of ions from this idealized behavior. Since the approximation becomes exact for a specific pair of oppositely charged ions, the true value of ∆H aq °[H + ] is expected to be commonly shared on plots of the approximation vs the difference in cluster-ion solvation enthalpy for pairs of ions sharing the same number of solvating waters. The common points on such plots determine values of -1150.1 ( 0.9 kJ/mol (esd) for ∆H aq °[H + ] and -1104.5 ( 0.3 kJ/mol (esd) for ∆G aq °[H + ]. The uncertainties (representing only the random errors of the procedure) are smaller than expected because the cluster data of 20 different pairings of oppositely charged ions are folded into the determination.
The mechanism of orotidine 5'-monophosphate decarboxylase (OMP decarboxylase, ODCase) was studied using the decarboxylation of orotic acid analogues as a model system. The rate of decarboxylation of 1,3-dimethylorotic acid and its analogues as well as the stability of their corresponding carbanion intermediates was determined. The results have shown that the stability of the carbanion intermediate is not a critical factor in the rate of decarboxylation. On the other hand, the reaction rate is largely dependent on the equilibrium constant for the formation of a zwitterion. Based on these results, we have proposed a new mechanism in which ODCase catalyzes the decarboxylation of OMP by binding the substrate in a zwitterionic form and providing a destabilizing environment for the carboxylate group of OMP.
scite is a Brooklyn-based organization that helps researchers better discover and understand research articles through Smart Citations–citations that display the context of the citation and describe whether the article provides supporting or contrasting evidence. scite is used by students and researchers from around the world and is funded in part by the National Science Foundation and the National Institute on Drug Abuse of the National Institutes of Health.