Fungi are prominent components of most terrestrial ecosystems, both in terms of biomass and ecosystem functioning, but the hyper-diverse nature of most communities has obscured the search for unifying principles governing community organization. In particular, unlike plants and animals, observational studies provide little evidence for the existence of niche processes in structuring fungal communities at broad spatial scales. This limits our capacity to predict how communities, and their functioning, vary across landscapes. We outline how a shift in focus, from taxonomy toward functional traits, might prove to be valuable in the search for general patterns in fungal ecology. We build on theoretical advances in plant and animal ecology to provide an empirical framework for a trait-based approach in fungal community ecology. Drawing upon specific characteristics of the fungal system, we highlight the significance of drought stress and combat in structuring free-living fungal communities. We propose a conceptual model to formalize how trade-offs between stress-tolerance and combative dominance are likely to organize communities across environmental gradients. Given that the survival of a fungus in a given environment is contingent on its ability to tolerate antagonistic competitors, measuring variation in combat trait expression along environmental gradients provides a means of elucidating realized, from fundamental niche spaces. We conclude that, using a trait-based understanding of how niche processes structure fungal communities across time and space, we can ultimately link communities with ecosystem functioning. Our trait-based framework highlights fundamental uncertainties that require testing in the fungal system, given their potential to uncover general mechanisms in fungal ecology.

Research in environmental science relies heavily on global climatic grids derived from estimates of air temperature at around 2 meter above ground1-3. These climatic grids however fail to reflect conditions near and below the soil surface, where critical ecosystem functions such as soil carbon storage are controlled and most biodiversity resides4-8. By using soil temperature time series from over 8500 locations across all of the world’s terrestrial biomes4, we derived global maps of soil temperature-related variables at 1 km resolution for the 0–5 and 5–15 cm depth horizons. Based on these maps, we show that mean annual soil temperature differs markedly from the corresponding 2 m gridded air temperature, by up to 10°C, with substantial variation across biomes and seasons. Soils in cold and/or dry biomes are annually substantially warmer (3.6°C ± 2.3°C) than gridded air temperature, whereas soils in warm and humid environments are slightly cooler (0.7 ± 2.3°C). As a result, annual soil temperature varies less (by 17%) across the globe than air temperature. The effect of macroclimatic conditions on the difference between soil and air temperature highlights the importance of considering that macroclimate warming may not result in the same level of soil temperature warming. Similarly, changes in precipitation could alter the relationship between soil and air temperature, with implications for soil-atmosphere feedbacks9. Our results underpin that the impacts of climate and climate change on biodiversity and ecosystem functioning are inaccurately assessed when air rather than soil temperature is used, especially in cold environments.

Most trees form symbioses with ectomycorrhizal fungi (EMF) which influence access to growth-limiting soil resources. Mesocosm experiments repeatedly show that EMF species differentially affect plant development, yet whether these effects ripple up to influence the growth of entire forests remains unknown. Here we tested the effects of EMF composition and functional genes relative to variation in well-known drivers of tree growth by combining paired molecular EMF surveys with high-resolution forest inventory data across 15 European countries. We show that EMF composition was linked to a three-fold difference in tree growth rate even when controlling for the primary abiotic drivers of tree growth. Fast tree growth was associated with EMF communities harboring high inorganic but low organic nitrogen acquisition gene proportions and EMF which form contact versus medium-distance fringe exploration types. These findings suggest that EMF composition is a strong bio-indicator of underlying drivers of tree growth and/or that variation of forest EMF communities causes differences in tree growth. While it may be too early to assign causality or directionality, our study is one of the first to link fine-scale variation within a key component of the forest microbiome to ecosystem functioning at a continental scale.

Fungi play many essential roles in ecosystems. They facilitate plant access to nutrients and water, serve as decay agents that cycle carbon and nutrients through the soil, water and atmosphere, and are major regulators of macro-organismal populations. Although technological advances are improving the detection and identification of fungi, there still exist key gaps in our ecological knowledge of this kingdom, especially related to function. Trait-based approaches have been instrumental in strengthening our understanding of plant functional ecology and, as such, provide excellent models for deepening our understanding of fungal functional ecology in ways that complement insights gained from traditional and -omics-based techniques. In this review, we synthesize current knowledge of fungal functional ecology, taxonomy and systematics and introduce a novel database of fungal functional traits (FunFun). FunFun is built to interface with other databases to explore and predict how fungal functional diversity varies by taxonomy, guild, and other evolutionary or ecological grouping variables. To highlight how a quantitative trait-based approach can provide new insights, we describe multiple targeted examples and end by suggesting next steps in the rapidly growing field of fungal functional ecology.

The constant provision of plant productivity is integral to supporting the liability of ecosystems and human wellbeing in global drylands. Drylands are paradigmatic examples of systems prone to experiencing abrupt changes in their functioning. Indeed, space-for-time substitution approaches suggest that abrupt changes in plant productivity are widespread, but this evidence is less clear using observational time series or experimental data at a large scale. Studying the prevalence and, most importantly, the unknown drivers of abrupt (rather than gradual) dynamical patterns in drylands may help to unveil hotspots of current and future dynamical instabilities in drylands. Using a 20-y global satellite-derived temporal assessment of dryland Normalized Difference Vegetation Index (NDVI), we show that 50% of all dryland ecosystems exhibiting gains or losses of NDVI are characterized by abrupt positive/negative temporal dynamics. We further show that abrupt changes are more common among negative than positive NDVI trends and can be found in global regions suffering recent droughts, particularly around critical aridity thresholds. Positive abrupt dynamics are found most in ecosystems with low seasonal variability or high aridity. Our work unveils the high importance of climate variability on triggering abrupt shifts in vegetation and it provides missing evidence of increasing abruptness in systems intensively managed by humans, with low soil organic carbon contents, or around specific aridity thresholds. These results highlight that abrupt changes in dryland dynamics are very common, especially for productivity losses, pinpoint global hotspots of dryland vulnerability, and identify drivers that could be targeted for effective dryland management.