Larvae of this fluke are novel causes of granulomatous eye disease in children.
No abstract
Members of the family Gastrothylacidae (Trematoda: Digenea: Paramphistomata) are parasitic in ruminants throughout Africa and Asia. In north-east India, five species of pouched amphistomes, namely Fischoederius cobboldi, F. elongatus, Gastrothylax crumenifer, Carmyerius spatiosus and Velasquezotrema tripurensis, belonging to this family have been reported so far. In the present study, the molecular phylogeny of these five gastrothylacid species is derived using the second internal transcribed spacer (ITS2) sequence and secondary structure analyses. ITS2 sequence analysis was carried out to see the occurrence of interspecific variations among the species. Phylogenetic analyses were performed for primary sequence data alone as well as the combined sequence-structure information using neighbour-joining and Bayesian approaches. The sequence analysis revealed that there exist considerable interspecific variations among the various gastrothylacid fluke species. In contrast, the inferred secondary structures for the five species using minimum free energy modelling showed structural identities, in conformity with the core four-helix domain structure that has been recently identified as common to almost all eukaryotic taxa. The phylogenetic tree reconstructed using combined sequence-structure data showed a better resolution, as compared to the one using sequence data alone, with the gastrothylacid species forming a monophyletic group that is well separated from members of the other family, Paramphistomidae, of the amphistomid flukes group. The study provides the molecular characterization based on primary sequence data of the rDNA ITS2 region of the gastrothylacid amphistome flukes. Results also demonstrate the phylogenetic utility of the ITS2 sequence-secondary structure data for inferences at higher taxonomic levels.
Understanding the pattern of biodiversity along environmental gradients helps in identifying diversity hotspot areas that can be prioritized for conservation. While the elevational distribution of several taxa has been studied, responses of the subgroups within a taxon to elevation and its associated factors are not properly understood. Here we study species richness and butterfly density along an elevation gradient in Sikkim, Eastern Himalaya, India and explore the underlying causes of the patterns. We sampled butterflies using a fixed-width point count method in 16 elevational bands (150-200 m intervals), between a range of 300 and 3300 m a.s.l. We categorized butterflies into various subgroups based on family, range size, biogeographic affinity, and host-plant specialization. We recorded 3603 individuals and 253 species of butterflies after the completion of 1860 point counts. Overall, species richness in the majority of the subgroups (except for Riodinidae and Palearctic species) declines with elevation, as does the density of almost all the subgroups. From a selection of environmental factors, annual actual evapotranspiration has the strongest effect on the species richness pattern of butterflies as well as on the density of the overall butterfly community, especially the Lycaenidae family. The richness and density of butterfly groups display varied responses to the richness and density of trees and shrubs. The conducive climatic conditions and diverse habitats in the lower valleys of the Eastern Himalaya support a high diversity of butterflies (with majority of small range species) and thus warrants conservation attention. Highlights • The distribution of biodiversity along mountain elevational gradients has been well studied, but the disparity in patterns between various organisms and associated factors makes it difficult to develop a universal model for explaining the variation of biodiversity. • We report elevational patterns of species richness and density of butterflies in the Eastern Himalaya, both at whole group and subgroup levels. • A general decline in species richness and density with elevation is not supported for Riodinidae and for Palearctic species. • A measure of water energy balance, annual actual evapotranspiration, is the best correlated variable with species richness trends in butterflies. • Our paper highlights the importance of low elevation forests for butterfly diversity in the Eastern Himalaya.
Among the digenetic trematodes, paramphistomes are known to be the causative agent of "amphistomiasis" or the stomach fluke disease of domestic and wild animals, mainly ruminants. The use of 28S (divergent domains) and 18S rRNA for phylogenetic inference is significantly warranted for these flukes since it is as yet limited to merely the exploration of the second internal transcribed spacer (ITS2) region. The present study intended to explore the divergent domains (D1-D3) of 28S rRNA and simultaneously equate the phylogenetic information with 18S rRNA in paramphistomes. Divergence of the 28S rRNA domains was evident amongst the divergent (D) domains, where D1 domain emerged as the most variable and D2, the most robust domain, since the latter could provide a higher resolution of the species. D2 was the only domain that comprised compensatory mutations in the helices of its structural constraints; this domain is thus well suited for species distinction and may be considered a potential DNA barcode complementary to mitochondrial DNA. 28S (D1 + D2 + D3) rRNA provided a significant resolution of the taxa corroborating with the taxonomy of these flukes and thus proved to be more robust as a phylogenetic marker for lower levels than 18S rRNA. Phylogenetic inferences of paramphitomes are still scarcely explored; additional data from other taxa belonging to this family may estimate better the biodiversity of these flukes.
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