Immunoglobulin G (IgG) glycosylation is essential for function of the immune system, but the genetic and environmental factors that underlie its inter-individual variability are not well defined. The Collaborative Cross (CC) genetic resource harnesses over 90% of the common genetic variation of the mouse. By analyzing the IgG glycome composition of 95 CC strains, we made several important observations: (i) glycome variation between mouse strains was higher than between individual humans, despite all mice having the same environmental influences; (ii) five genetic loci were found to be associated with murine IgG glycosylation; (iii) variants outside traditional glycosylation site motifs affected glycome variation; (iv) bisecting N-acetylglucosamine (GlcNAc) was produced by several strains although most previous studies have reported the absence of glycans containing the bisecting GlcNAc on murine IgGs; and (v) common laboratory mouse strains are not optimal animal models for studying effects of glycosylation on IgG function.
Much of the research on insulators in Drosophila has been done with transgenic constructs using the white gene (mini-white) as reporter. Hereby we report that the sequence between the white and CG32795 genes in Drosophila melanogaster contains an insulator of a novel kind. Its functional core is within a 368 bp segment almost contiguous to the white 3′UTR, hence we name it as Wari (white-abutting resident insulator). Though Wari contains no binding sites for known insulator proteins and does not require Su(Hw) or Mod(mdg4) for its activity, it can equally well interact with another copy of Wari and with unrelated Su(Hw)-dependent insulators, gypsy or 1A2. In its natural downstream position, Wari reinforces enhancer blocking by any of the three insulators placed between the enhancer and the promoter; again, Wari–Wari, Wari–gypsy or 1A2–Wari pairing results in mutual neutralization (insulator bypass) when they precede the promoter. The distressing issue is that this element hides in all mini-white constructs employed worldwide to study various insulators and other regulatory elements as well as long-range genomic interactions, and its versatile effects could have seriously influenced the results and conclusions of many works.
Twelve accessions classified as Pisum sativum subsp. elatius, mostly from West and Central Mediterranean, were analysed for three markers from different cellular genomes: rbcL (plastid genome), coxI (mitochondrial genome) and SCA (nuclear genome). Based on geographical distribution of their allele combinations analysed in this and the earlier study, we suggest a putative history of wild representatives of P. sativum. The ancestor of this species belonged to lineage A (coxI?, rbcL?, SCA f ); it appeared in East Mediterranean, then spread westward most probably during one of the Pleistocene coolings when the sea was smaller, so that representatives of lineage A remained in the Eastern Mediterranean and on the islands of Sicily and Menorca. Mutation leading to the loss of the restriction site for PsiI in coxI-, gave rise to lineage C (coxI-, rbcL?, SCA f ) which spread widely in the Mediterranean and is now found in France, Greece and Ethiopia. Mutation leading to rbcL-gave rise to lineage D (coxI-, rbcL-, SCA f ), now found in Egypt (P. sativum subsp. jomardii) and Spain. Mutational transition of SCA f to SCA s most probably took place in North-Eastern Mediterranean since the resulting lineage B (coxI-, rbcL-, SCA s ) now occupies the Tauro-Caucasian area. In Asia Minor and North Israel, line B met the ancestral line A so that both lines coexist there presently. The lineage B gave rise to the cultivated P. sativum subsp. sativum.
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