Two years of field sampling aimed to establish the predominance and association among the fungal pathogens causing Fusarium ear blight (FEB) in four European countries (Hungary, Ireland, Italy and the UK). A PCR-based method was used to detect four Fusarium species and two varieties of Microdochium nivale present in the samples. The prevalence of FEB pathogens differed significantly between countries. Overall, all pathogens were commonly detected in Ireland and to a lesser extent in the UK. In contrast, only two species, F. graminearum and F. poae, were regularly detected in Italy and Hungary. Fusarium culmorum was rarely detected except in Ireland. Log-linear models were used to determine whether there is the independence of the six FEB pathogens at each sampling site. Significant two-pathogen interactions were frequently observed, particularly in harvest samples; all these significant two-pathogen interactions were of the synergistic type, except between F. poae and F. culmorum, and were generally consistent over the 2 years and four countries. Fusarium graminearum and F. poae were least frequently involved in two pathogen interactions but were involved in most of the nine significant three-pathogen interactions. However, only the interaction between F. graminearum, F. avenaceum and F. poae was significant in both years. Potential implications of the present results in FEB management are discussed.

Scientific communication is facilitated by a data-driven, scientifically sound taxonomy that considers the end-user's needs and established successful practice. Previously (Geiser et al. 2013; Phytopathology 103:400-408. 2013), the Fusarium community voiced near unanimous support for a concept of Fusarium that represented a clade comprising all agriculturally and clinically important Fusarium species, including the F. solani Species Complex (FSSC). Subsequently, this concept was challenged by one research group (Lombard et al. 2015 Studies in Mycology 80: 189-245) who proposed dividing Fusarium into seven genera, including the FSSC as the genus Neocosmospora, with subsequent justification based on claims that the Geiser et al. (2013) concept of Fusarium is polyphyletic (Sandoval-Denis et al. 2018; Persoonia 41:109-129). Here we test this claim, and provide a phylogeny based on exonic nucleotide sequences of 19 orthologous protein-coding genes that strongly support the monophyly of Fusarium including the FSSC. We reassert the practical and scientific argument in support of a Fusarium that includes the FSSC and several other basal lineages, consistent with the longstanding use of this name among plant pathologists, medical mycologists, quarantine officials, regulatory agencies, students and researchers with a stake in its taxonomy. In recognition of this monophyly, 40 species recently described as Neocosmospora were recombined in Fusarium, and nine others were renamed Fusarium. Here the global Fusarium community voices strong support for the inclusion of the FSSC in Fusarium, as it remains the best scientific, nomenclatural and practical taxonomic option available.

Over 4 years, the environmental conditions and the causal agents of Fusarium head blight (FHB) disease of wheat were determined in field sites in four European countries: Hungary, Ireland, Italy, and the United Kingdom. Polymerase chain reaction-based methods were used to detect each species causing FHB and quantify its DNA (as a measurement of fungal abundance) in the samples. Canonical correspondence analysis (CCA) was used to determine the relationship of the incidence and abundance of each species with weather variables. CCA indicated that little variability in the species prevalence data was explained by the weather variables. In contrast, a greater proportion of variability in abundance data was accounted for by the weather variables. Most samples contained two or more species and statistical analysis suggested that these species tended to coexist at field sites. CCA also indicated that there were differences in the relationships of the prevalence and abundance of the six FHB species with environmental variables. Fusarium poae was associated with relatively drier and warmer conditions, whereas F. graminearum was associated with warmer/humid conditions. F. avenaceum and F. culmorum were both associated with niches of cooler/wet/humid conditions. Two Microdochium species were associated with regions of relatively cool/moderate temperatures and frequent rainfalls of short duration. The results also suggested that environmental conditions differentially affect the infection and colonization processes, and the comparative abundance of the six species.

To assess the potential for mating in several Fusarium species with no known sexual stage, we developed degenerate and semidegenerate oligonucleotide primers to identify conserved mating type (MAT) sequences in these fungi. The putative ␣ and high-mobility-group (HMG) box sequences from Fusarium avenaceum, F. culmorum, F. poae, and F. semitectum were compared to similar sequences that were described previously for other members of the genus. The DNA sequences of the regions flanking the amplified MAT regions were obtained by inverse PCR. These data were used to develop diagnostic primers suitable for the clear amplification of conserved mating type sequences from any member of the genus Fusarium. By using these diagnostic primers, we identified mating types of 122 strains belonging to 22 species of Fusarium. The ␣ box and the HMG box from the mating type genes are transcribed in F. avenaceum, F. culmorum, F. poae, and F. semitectum. The novelty of the PCR-based mating type identification system that we developed is that this method can be used on a wide range of Fusarium species, which have proven or expected teleomorphs in different ascomycetous genera, including Calonectria, Gibberella, and Nectria.The genus Fusarium contains filamentous ascomycete fungi with a worldwide distribution. Fusarium species can parasitize cultivated plants (1) and/or produce mycotoxins that pose serious hazards to human and animal health (9, 18). Species of Fusarium can grow successfully on a variety of substrates, can tolerate diverse environmental conditions, and have high levels of intraspecific genetic and genotypic diversity (for examples, see references 8, 12, 17, and 26). Neither the origins of this diversity nor the mechanisms that maintain it are well understood.Meiotic recombination can generate and maintain genotypic variation and result in the reassortment of genes that govern traits such as virulence or toxin production (7). The sexual spores (ascospores) produced by some Fusarium species also may function as infectious propagules (11,19). Although several Fusarium species have a known sexual cycle, i.e., they mate in either a homothallic or heterothallic manner followed by subsequent meiosis and the production of ascospores, important pathogenic species, including Fusarium avenaceum, Fusarium cerealis, Fusarium culmorum, Fusarium equiseti, Fusarium poae, and Fusarium sporotrichioides, have no known sexual stage.Assessing the potential for mating by toxigenic strains of Fusarium would increase our understanding of the genetic mechanisms that maintain intraspecific diversity and biological and evolutionary species integrity. The frequency of sexual reproduction is also an important parameter for the design of strategies to control plant pathogens, since these strategies are often different for clonally and sexually reproducing organisms. High levels of race-specific resistance can be developed in plant cultivars against clonally reproducing organisms, whereas horizontal resistance could be more effective against pathogen...