Statistical shape analysis can be done in a Riemannian framework by endowing the set of shapes with a Riemannian metric. Sobolev metrics of order two and higher on shape spaces of parametrized or unparametrized curves have several desirable properties not present in lower order metrics, but their discretization is still largely missing. In this paper, we present algorithms to numerically solve the geodesic initial and boundary value problems for these metrics. The combination of these algorithms enables one to compute Karcher means in a Riemannian gradient-based optimization scheme and perform principal component analysis and clustering. Our framework is sufficiently general to be applicable to a wide class of metrics. We demonstrate the effectiveness of our approach by analyzing a collection of shapes representing HeLa cell nuclei.
In this paper we study a class of Riemannian metrics on the space of unparametrized curves and develop a method to compute geodesics with given boundary conditions. It extends previous works on this topic in several important ways. The model and resulting matching algorithm integrate within one common setting both the family of H 2 -metrics with constant coefficients and scale-invariant H 2 -metrics on both open and closed immersed curves. These families include as particular cases the class of first-order elastic metrics. An essential difference with prior approaches is the way that boundary constraints are dealt with. By leveraging varifold-based similarity metrics we propose a relaxed variational formulation for the matching problem that avoids the necessity of optimizing over the reparametrization group. Furthermore, we show that we can also quotient out finite-dimensional similarity groups such as translation, rotation and scaling groups. The different properties and advantages are illustrated through numerical examples in which we also provide a comparison with related diffeomorphic methods used in shape registration.2000 Mathematics Subject Classification. 68Q25, 68R10, 68U05. 1 Note, that the invariance of the metric is only a necessary condition for a metric on the space of parametrized curves to induce a metric on unparametrized curves. However, all the metrics considered in this article do induce Riemannian metrics on the quotient space. For details, see [36].2 This result has been later extended to the space of parametrized curves in [3]. 3 The article [37] studied the family of elastic metrics with different choices of parameters on the space of parametrized curves. This analysis was, however, not extended to the space of unparametrized curves, which is the more relevant object for applications.
Second order Sobolev metrics are a useful tool in the shape analysis of curves. In this paper we combine these metrics with varifoldbased inexact matching to explore a new strategy of computing geodesics between unparametrized curves. We describe the numerical method used for solving the inexact matching problem, apply it to study the shape of mosquito wings and compare our method to curve matching in the LDDMM framework.
Second order Sobolev metrics on the space of regular unparametrized planar curves have several desirable completeness properties not present in lower order metrics, but numerics are still largely missing. In this paper, we present algorithms to numerically solve the initial and boundary value problems for geodesics. The combination of these algorithms allows to compute Karcher means in a Riemannian gradient-based optimization scheme. Our framework has the advantage that the constants determining the weights of the zero, first, and second order terms of the metric can be chosen freely. Moreover, due to its generality, it could be applied to more general spaces of mapping. We demonstrate the effectiveness of our approach by analyzing a collection of shapes representing physical objects.
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