Grape () color somatic variants that can be used to develop new grapevine cultivars occasionally appear associated with deletion events of uncertain origin. To understand the mutational mechanisms generating somatic structural variation in grapevine, we compared the Tempranillo Blanco (TB) white berry somatic variant with its black berry ancestor, Tempranillo Tinto. Whole-genome sequencing uncovered a catastrophic genome rearrangement in TB that caused the hemizygous deletion of 313 genes, including the loss of the functional copy for the transcription factors required for anthocyanin pigmentation in the berry skin. Loss of heterozygosity and decreased copy number delimited interspersed monosomic and disomic regions in the right arm of linkage groups 2 and 5. At least 11 validated clustered breakpoints involving intrachromosomal and interchromosomal translocations between three linkage groups flanked the deleted fragments, which, according to segregation analyses, are phased in a single copy of each of the affected chromosomes. These hallmarks, along with the lack of homology between breakpoint joins and the randomness of the order and orientation of the rearranged fragments, are all consistent with a chromothripsis-like pattern generated after chromosome breakage and illegitimate rejoining. This unbalanced genome reshuffling has additional consequences in reproductive development. In TB, lack of sexual transmission of rearranged chromosomes associates with low gamete viability, which compromises fruit set and decreases fruit production. Our findings show that catastrophic genome rearrangements arise spontaneously and stabilize during plant somatic growth. These dramatic rearrangements generate new interesting phenotypes that can be selected for the improvement of vegetatively propagated plant species.

Expansive clay buffers in radioactive waste disposal designs experience cyclic drying and wetting paths during different stages of their design life. Clayey soils subjected to these processes develop swelling and shrinkage deformations, which give rise to the accumulation of compression or expansion strains during suction cycles. Experimental studies were undertaken using oedometer tests on an artificially prepared bentonite-sand mixture (80% bentonite by dry mass). In order to study these processes and to identify the most important features controlling soil behaviour, several wetting-drying cycles with suctions ranging between 130 and 4 MPa were applied using vapour equilibrium technique and covering a wide range of overconsolidation ratios (OCR). The tested samples showed cumulative shrinkage strains along the successive cycles, which became more significant at increasing vertical net stresses (low OCR values). However, no accumulation of expansion strains was detected at elevated OCR values. Test results were interpreted and predicted within the context of an elastoplastic model proposed by Alonso et al., 1999, [Alonso, E.E., Vaunat, J., Gens, A., (1999. Modelling the mechanical behaviour of expansive clays. Engineering Geology, 54,[173][174][175][176][177][178][179][180][181][182][183] which takes into account the accumulation of strains. A good correspondence between measured soil response and model predictions was observed. The paper also presents the methodology to derive the constitutive parameters. D