We report a bottom-up approach for the fabrication of metallo-porphyrin compounds and nanoarchitectures in two dimensions. Scanning tunneling microscopy and tunneling spectroscopy observations elucidate the interaction of highly regular porphyrin layers self-assembled on a Ag(111) surface with iron monomers supplied by an atomic beam. The Fe is shown to be incorporated selectively in the porphyrin macrocycle whereby the template structure is strictly preserved. The immobilization of the molecular reactants allows the identification of single metalation events in a novel reaction scheme. Because the template layers provide extended arrays of reaction sites, superlattices of coordinatively unsaturated and magnetically active metal centers are obtained. This approach offers novel pathways to realize metallo-porphyrin compounds, low-dimensional metal-organic architectures and patterned surfaces which cannot be achieved by conventional means.

The engineering of complex architectures from functional molecules on surfaces provides new pathways to control matter at the nanoscale. In this article, we present a combined study addressing the self-assembly of the amino acid L-methionine on Ag(111). Scanning tunneling microscopy data reveal spontaneous ordering in extended molecular chains oriented along high-symmetry substrate directions. At intermediate coverages, regular biomolecular gratings evolve whose periodicity can be tuned at the nanometer scale by varying the methionine surface concentration. Their characteristics and stability were confirmed by helium atomic scattering. X-ray photoemission spectroscopy and high-resolution scanning tunneling microscopy data reveal that the L-methionine chaining is mediated by zwitterionic coupling, accounting for both lateral links and molecular dimerization. This methionine molecular recognition scheme is reminiscent of sheet structures in amino acid crystals and was corroborated by molecular mechanics calculations. Our findings suggest that zwitterionic assembly of amino acids represents a general construction motif to achieve biomolecular nanoarchitectures on surfaces.nanochemistry ͉ scanning tunneling microscopy ͉ supramolecular engineering ͉ surface chemistry ͉ x-ray photoemission spectroscopy T he controlled self-assembly of functional molecular species on well defined surfaces is a promising approach toward the design of nanoscale architectures (1). By using this methodology, regular low-dimensional systems such as supramolecular clusters, chains, or nanoporous arrays can be fabricated (2-6). A wide variety of molecular species as well as substrate materials proved to be useful (7), exploiting noncovalent directional interactions including dipole-dipole coupling (2, 3), hydrogen bridges (4,5,(8)(9)(10)(11), and metal-ligand interactions (6,(12)(13)(14)(15). With the exception of multiple H-bonded networks or coordination networks incorporating metal centers, it remains challenging to realize robust systems, and there is a need to develop protocols exploiting stronger intermolecular bonds to realize purely organic low-dimensional architectures. Small biological molecules such as amino acids or DNA base molecules represent an important class of building blocks that are of interest for molecular architectonic on surfaces because they inherently qualify for molecular recognition and self-assembly (16)(17)(18)(19)(20). The interaction between biomolecules and solid surfaces is decisive for the development of bioanalytical devices or biocompatible materials (21-23) as well as for a fundamental understanding of protein-surface bonding (24). Moreover, in three dimensions the amino acids provide assets to engineer distinct network structures based on zwitterionic coupling schemes (25-27), which may be categorized as subclass of ionic self-assembly (28), and thus are promising units to create robust nanoarchitectures. However, to date, the advantages of zwitterionic supramolecular synthons have not been exploited in ...

We present a low-temperature scanning tunneling microscopy (STM) study on the supramolecular ordering of tetrapyridyl-porphyrin (TPyP) molecules on Ag(111). Vapor deposition in a wide substrate temperature range reveals that TPyP molecules easily diffuse and self-assemble into large, highly ordered chiral domains. We identify two mirror-symmetric unit cells, each containing two differently oriented molecules. From an analysis of the respective arrangement it is concluded that lateral intermolecular interactions control the packing of the layer, while its orientation is induced by the coupling to the substrate. This finding is corroborated by molecular mechanics calculations. High-resolution STM images recorded at 15 K allow a direct identification of intramolecular features. This makes it possible to determine the molecular conformation of TPyP on Ag(111). The pyridyl groups are alternately rotated out of the porphyrin plane by an angle of 60 degrees.

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