Context: Topic modeling finds human-readable structures in unstructured textual data. A widely used topic modeling technique is Latent Dirichlet allocation. When running on different datasets, LDA suffers from "order effects", i.e., different topics are generated if the order of training data is shuffled. Such order effects introduce a systematic error for any study. This error can relate to misleading results; specifically, inaccurate topic descriptions and a reduction in the efficacy of text mining classification results. Objective: To provide a method in which distributions generated by LDA are more stable and can be used for further analysis. Method: We use LDADE, a search-based software engineering tool which uses Differential Evolution (DE) to tune the LDA's parameters. LDADE is evaluated on data from a programmer information exchange site (Stackoverflow), title and abstract text of thousands of Software Engineering (SE) papers, and software defect reports from NASA. Results were collected across different implementations of LDA (Python+Scikit-Learn, Scala+Spark) across Linux platform and for different kinds of LDAs (VEM, Gibbs sampling). Results were scored via topic stability and text mining classification accuracy. Results: In all treatments: (i) standard LDA exhibits very large topic instability; (ii) LDADE's tunings dramatically reduce cluster instability; (iii) LDADE also leads to improved performances for supervised as well as unsupervised learning. Conclusion: Due to topic instability, using standard LDA with its "off-the-shelf" settings should now be depreciated. Also, in future, we should require SE papers that use LDA to test and (if needed) mitigate LDA topic instability. Finally, LDADE is a candidate technology for effectively and efficiently reducing that instability.

Machine learning techniques applied to software engineering tasks can be improved by hyperparameter optimization, i.e., automatic tools that find good settings for a learner's control parameters. We show that such hyperparameter optimization can be unnecessarily slow, particularly when the optimizers waste time exploring "redundant tunings", i.e., pairs of tunings which lead to indistinguishable results. By ignoring redundant tunings, DODGE(E), a tuning tool, runs orders of magnitude faster, while also generating learners with more accurate predictions than seen in prior state-of-the-art approaches.

We report and fix an important systematic error in prior studies that ranked classifiers for software analytics. Those studies did not (a) assess classifiers on multiple criteria and they did not (b) study how variations in the data affect the results. Hence, this paper applies (a) multi-performance criteria while (b) fixing the weaker regions of the training data (using SMOTUNED, which is an autotuning version of SMOTE). This approach leads to dramatically large increases in software defect predictions when applied in a 5*5 cross-validation study for 3,681 JAVA classes (containing over a million lines of code) from open source systems, SMOTUNED increased AUC and recall by 60% and 20% respectively. These improvements are independent of the classifier used to predict for defects. Same kind of pattern (improvement) was observed when a comparative analysis of SMOTE and SMOTUNED was done against the most recent class imbalance technique.In conclusion, for software analytic tasks like defect prediction, (1) data pre-processing can be more important than classifier choice, (2) ranking studies are incomplete without such pre-processing, and (3) SMOTUNED is a promising candidate for pre-processing.• RQ1: Are the default "off-the-shelf" parameters for SMOTE appropriate for all data sets?Result 1 SMOTUNED learned different parameters for each data set, all of which were very different from default SMOTE.• RQ2: Is there any benefit in tuning the default parameters of SMOTE for each new data set? Result 2Performance improvements using SMOTUNED are dramatically large, e.g., improvements in AUC up to 60% against SMOTE.In those results, we see that while no learner was best across all data sets and performance criteria, SMOTUNED was most often seen in the best results. That is, creating better training data might be more important than the subsequent choice of classifiers.

This paper explores the structure of research papers in software engineering. Using text mining, we study 35,391 software engineering (SE) papers from 34 leading SE venues over the last 25 years. These venues were divided, nearly evenly, between conferences and journals. An important aspect of this analysis is that it is fully automated and repeatable. To achieve that automation, we used topic modeling (with LDA) to mine 10 topics that represent much of the structure of contemporary SE. The 10 topics presented here should not be "set in stone" as the only topics worthy of study in SE. Rather our goal is to report that (a) text mining methods can detect large scale trends within our community; (b) those topic change with time; so (c) it is important to have automatic agents that can update our understanding of our community whenever new data arrives.

This paper introduces Data-Driven Search-based Software Engineering (DSE), which combines insights from Mining Software Repositories (MSR) and Search-based Software Engineering (SBSE). While MSR formulates software engineering problems as data mining problems, SBSE reformulate Software Engineering (SE) problems as optimization problems and use meta-heuristic algorithms to solve them. Both MSR and SBSE share the common goal of providing insights to improve software engineering. The algorithms used in these two areas also have intrinsic relationships. We, therefore, argue that combining these two fields is useful for situations (a) which require learning from a large data source or (b) when optimizers need to know the lay of the land to find better solutions, faster.This paper aims to answer the following three questions: (1) What are the various topics addressed by DSE?, (2) What types of data are used by the researchers in this area?, and (3) What research approaches do researchers use? The paper briefly sets out to act as a practical guide to develop new DSE techniques and also to serve as a teaching resource.This paper also presents a resource (tiny.cc/data-se) for exploring DSE. The resource contains 89 artifacts which are related to DSE, divided into 13 groups such as requirements engineering, software product lines, software processes. All the materials in this repository have been used in recent software engineering papers; i.e., for all this material, there exist baseline results against which researchers can comparatively assess their new ideas.