In this review of seamount ecology, we address a number of key scientific issues concerning the structure and function of benthic communities, human impacts, and seamount management and conservation. We consider whether community composition and diversity differ between seamounts and continental slopes, how important dispersal capabilities are in seamount connectivity, what environmental factors drive species composition and diversity, whether seamounts are centers of enhanced biological productivity, and whether they have unique trophic architecture. We discuss how vulnerable seamount communities are to fishing and mining, and how we can balance exploitation of resources and conservation of habitat. Despite considerable advances in recent years, there remain many questions about seamount ecosystems that need closer integration of molecular, oceanographic, and ecological research.

The benthic macrofauna of a group of small seamounts south of Tasmania was surveyed with a dredge and camera to assess the impact of trawling for orange roughy (Hoplostethus atlanticus; Trachichthyidae) and the efficacy of a proposed marine reserve. The seamounts were generally 300 to 600 m high and the peaks ranged from 660 to 1700 m depth. The fauna was diverse: 262 species of invertebrates and 37 species of fishes were enumerated, compared with 598 species of invertebrates previously reported from seamounts worldwide. On seamounts that peaked at depths <1400 m and that had not been heavily fished, the invertebrate fauna was dense, diverse and dominated by suspension feeders, including a matrix-forming colonial hard coral (Solenosmilia variabilis) and a variety of hard and soft (gorgonian and antipatharian) corals, hydroids, sponges and suspension-feeding ophiuroids and sea stars. Of the invertebrate species, 24 to 43% were new to science, and between 16 and 33% appeared to be restricted to the seamount environment. Trawl operations effectively removed the reef aggregate from the most heavily fished seamounts. The benthic biomass of samples from unfished seamounts was 106% greater than from heavily fished seamounts and the number of species per sample was 46% greater. Living S. variabilis was not found on seamounts peaking at depths >1400 m. These seamounts were dominated by sea urchins and had lower biomass and fewer species per sample. However, few species were restricted to either the shallowest or deepest depths sampled. The fauna unique to the region's seamounts appears to be adequately represented within a recently established 'Marine Protected Area' that encloses 12 seamounts that peak at depths >1150 m.KEY WORDS: Seamount · Benthos · Impacts of trawling · Community structure 213: 111-125, 2001 rockhopper gear -large rubber bobbins and metal discs along the footrope -and precise electronic positioning systems both for the vessel and to monitor net performance. Seamounts are one such environment to become subject to intensive trawl fishing in recent decades. Resale or republication not permitted without written consent of the publisherMar Ecol Prog SerSeamounts provide a unique deep-sea environment due to the topographically-enhanced currents in their vicinity (Roden 1986). In the water column, substantial aggregations of deep-bodied fishes, such as the pelagic armourhead (Pseudopentaceros wheeleri), Sebastes spp., orange roughy (Hoplostethus atlanticus) and oreosomatids are commonly found around seamounts (Boehlert & Sasaki 1988, Koslow 1996, 1997. These aggregations are supported in the otherwise food-poor deep sea by the enhanced flux of prey organisms past the seamounts and the interception and trapping of vertical migrators by the uplifted topography (Tseitlin 1985, Genin et al. 1988, Koslow 1997. Discovery of these aggregations led to seamounts being increasingly targeted by trawlers throughout the world's oceans: i.e. the massive but short-lived fishery for pelagic armourhead in the N...

This review presents a comprehensive overview of the current status regarding the global diversity of the echinoderm class Ophiuroidea, focussing on taxonomy and distribution patterns, with brief introduction to their anatomy, biology, phylogeny, and palaeontological history. A glossary of terms is provided. Species names and taxonomic decisions have been extracted from the literature and compiled in The World Ophiuroidea Database, part of the World Register of Marine Species (WoRMS). Ophiuroidea, with 2064 known species, are the largest class of Echinodermata. A table presents 16 families with numbers of genera and species. The largest are Amphiuridae (467), Ophiuridae (344 species) and Ophiacanthidae (319 species). A biogeographic analysis for all world oceans and all accepted species was performed, based on published distribution records. Approximately similar numbers of species were recorded from the shelf (n = 1313) and bathyal depth strata (1297). The Indo-Pacific region had the highest species richness overall (825 species) and at all depths. Adjacent regions were also relatively species rich, including the North Pacific (398), South Pacific (355) and Indian (316) due to the presence of many Indo-Pacific species that partially extended into these regions. A secondary region of enhanced species richness was found in the West Atlantic (335). Regions of relatively low species richness include the Arctic (73 species), East Atlantic (118), South America (124) and Antarctic (126).

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DNA barcode sequences (a 657-bp segment of the mtDNA cytochrome oxidase I gene, COI) were collected from 191 species (503 specimens) of Echinodermata. All five classes were represented: Ophiuroidea, Asteroidea, Echinoidea, Holothuroidea and Crinoidea. About 30% of sequences were collected specifically for this study, the remainder came from GenBank. Fifty-one species were represented by multiple samples, with a mean intraspecific divergence of 0.62%. Several possible instances of cryptic speciation were noted. Thirty-two genera were represented by multiple species, with a mean congeneric divergence of 15.33%. One hundred and eighty-seven of the 191 species (97.9%) could be distinguished by their COI barcodes. Those that could not were from the echinoid genus Amblypneustes. Neighbour-joining trees of COI sequences generally showed low bootstrap support for anything other than shallow splits, although with very rare exceptions, members of the same class clustered together. Two ophiuran species, in both nucleotide and amino acid neighbour-joining trees, grouped loosely as sister taxa to Crinoidea rather than Ophiuroidea; sequences of these two species appear to have evolved very quickly. Results suggest that DNA barcoding is likely to be an effective, accurate and useful method of species diagnosis for all five classes of Echinodermata.

Aim  To relate patterns of distribution of marine echinoderms and decapods around southern Australia to major ecological and historical factors. Location  Shallow‐water (0–100 m) marine waters off southern Australia, south of 30° S. Methods  (1) Record the presence/absence of known echinoderm and decapod species in cells of c. 1° latitude and longitude, along the coast of southern mainland Australia and Tasmania. (2) Describe patterns in species composition, species richness and endemism through gradient analysis, ordination and cluster analysis. (3) Relate these patterns to distance and temperature gradients, the area of continental shelf, the average size of species range, and known historical factors. Results  Species composition varied with both latitude and longitude. Species richness was relatively constant from east to west but graded with latitude from high in the warm‐temperate regions around Perth and Sydney to low in cool‐temperate southern Tasmania. Species richness was not related to the area of continental shelf or average species range size. Species turnover was not correlated with rates of temperature change. It was problematic to separate distance from temperature gradients, but there was evidence that the southern distribution limits of some species are related to minimum sea surface temperature. Within the taxonomic groups surveyed, evolutionary radiation has been largely limited to a few cosmopolitan species‐rich genera. Main conclusions  There are historical as well as ecological hypotheses explaining the latitudinal gradient of marine species richness in southern Australia: (1) the continual invasion and speciation of species of tropical origin as Australia has split from Gondwana and drifted northward; (2) progressive extinction of some Gondwanan cool‐temperate species at the limits of their range; (3) low level of immigration of additional cool‐temperate species; and (4) some in situ endemic speciation.

Exon-capture studies have typically been restricted to relatively shallow phylogenetic scales due primarily to hybridization constraints. Here, we present an exon-capture system for an entire class of marine invertebrates, the Ophiuroidea, built upon a phylogenetically diverse transcriptome foundation. The system captures approximately 90% of the 1,552 exon target, across all major lineages of the quarter-billion-year-old extant crown group. Key features of our system are 1) basing the target on an alignment of orthologous genes determined from 52 transcriptomes spanning the phylogenetic diversity and trimmed to remove anything difficult to capture, map, or align; 2) use of multiple artificial representatives based on ancestral state reconstructions rather than exemplars to improve capture and mapping of the target; 3) mapping reads to a multi-reference alignment; and 4) using patterns of site polymorphism to distinguish among paralogy, polyploidy, allelic differences, and sample contamination. The resulting data give a well-resolved tree (currently standing at 417 samples, 275,352 sites, 91% data-complete) that will transform our understanding of ophiuroid evolution and biogeography.

Neuropeptides are a diverse class of intercellular signalling molecules that mediate neuronal regulation of many physiological and behavioural processes. Recent advances in genome/transcriptome sequencing are enabling identification of neuropeptide precursor proteins in species from a growing variety of animal taxa, providing new insights into the evolution of neuropeptide signalling. Here, detailed analysis of transcriptome sequence data from three brittle star species, Ophionotus victoriae, Amphiura filiformis and Ophiopsila aranea, has enabled the first comprehensive identification of neuropeptide precursors in the class Ophiuroidea of the phylum Echinodermata. Representatives of over 30 bilaterian neuropeptide precursor families were identified, some of which occur as paralogues. Furthermore, homologues of endothelin/CCHamide, eclosion hormone, neuropeptide-F/Y and nucleobinin/nesfatin were discovered here in a deuterostome/echinoderm for the first time. The majority of ophiuroid neuropeptide precursors contain a single copy of a neuropeptide, but several precursors comprise multiple copies of identical or non-identical, but structurally related, neuropeptides. Here, we performed an unprecedented investigation of the evolution of neuropeptide copy number over a period of approximately 270 Myr by analysing sequence data from over 50 ophiuroid species, with reference to a robust phylogeny. Our analysis indicates that the composition of neuropeptide ‘cocktails’ is functionally important, but with plasticity over long evolutionary time scales.