1Freshwater biodiversity is threatened by fertilizers and pesticides from agricultural sources. 2 Microbial communities can be resistant (i.e., community composition stays largely the same) or 3 resilient (i.e., composition changes but then returns to its initial state) to these contaminants. 4Even after changes in composition, communities may continue to support ecosystem processes 5 due to functional redundancy, in which different taxa carry out the same process, such that the 6 process is maintained even after some taxa are lost. To test the extent of resistance, resilience, 7 and functional redundancy in aquatic bacterial communities (bacterioplankton) faced with 8 agricultural stressors, we exposed freshwater mesocosms to two commonly used pesticides: the 9 herbicide Roundup (glyphosate) and the neonicotinoid insecticide imidacloprid, alone or in 10 combination, and in high or low nutrient backgrounds. Over the 42-day experiment, we tracked 11 bacterial density with flow cytometry, functional composition with Biolog EcoPlates, and 12 taxonomic diversity with culture-independent 16S rRNA gene amplicon sequencing. We show 13 that only glyphosate, but not imidacloprid or nutrients, measurably changed community 14 structure. Despite this change, metabolic capabilities were maintained, suggesting functional 15 redundancy. We further show that communities are resilient at broad, but not fine phylogenetic 16levels: the precise amplicon sequence variants (ASVs) driven below the limit of detection by 17 glyphosate stress do not return, but tend to be replaced by relatives within the same genus. 18Together, our results show that bacterioplankton are broadly resistant, resilient, and redundant 19 faced with severe agricultural stressors on weekly time scales, but that high doses of glyphosate 20can have longer-lasting effects on fine-scale diversity. 21 22 controlling biogeochemical cycles are found across different clades [2]. It has been suggested 40 that spatial and environmental heterogeneity (or fluctuations) and biotic interactions (e.g., 41 predation) are required to explain the widespread redundancy in biochemical pathways [6]. It is 42 also likely that communities are partially redundant (for certain general functions like respiration 43 or biomass production), but complementary (non-overlapping functions) for very specific 44 functions encoded by unique taxa [7]. The prevalence of, and reasons for, microbial community resistance, resilience, and functional redundancy are still debated [4,5] particularly in response to 46 novel anthropogenic disturbances which often involve combinations of stressors. 47 48 Agricultural expansion and intensification are main drivers of global environmental change in 49 both terrestrial and aquatic ecosystems [8-10]. Chemicals derived from agricultural landscapes, 50such as fertilizers and pesticides, are among the main sources of freshwater pollution [11], 51 leading to eutrophication [12,13] and biodiversity loss [14][15][16]. Agricultural runoff usually 52 contains a mixture...