2023
DOI: 10.1111/pbi.13859
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Abstract: Summary Wheat is a globally vital crop, but its limited genetic variation creates a challenge for breeders aiming to maintain or accelerate agricultural improvements over time. Introducing novel genes and alleles from wheat's wild relatives into the wheat breeding pool via introgression lines is an important component of overcoming this low variation but is constrained by poor genomic resolution and limited understanding of the genomic impact of introgression breeding programmes. By sequencing 17 hexaploid whe… Show more

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Cited by 11 publications
(2 citation statements)
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“…tauschii reference accession AL8/78 26 and 5 additional accessions that represent 5 different clades 27 , 4 Secale cereale accessions 67 , Secale. vavilovii 67 , Thinopyrum ponticum 68 , and T. aestivum cultivars Weebil 68 , Norin61 68 and Pavon76 69 were mapped to RefSeq v1.0 52 , filtered and SNP called as described for the genotyping above and in 25 . Homozygous SNPs were retained if they had between 10 and 60 reads supporting the alternative allele and an allele frequency > = 0.8.…”
Section: Methodsmentioning
confidence: 99%
See 1 more Smart Citation
“…tauschii reference accession AL8/78 26 and 5 additional accessions that represent 5 different clades 27 , 4 Secale cereale accessions 67 , Secale. vavilovii 67 , Thinopyrum ponticum 68 , and T. aestivum cultivars Weebil 68 , Norin61 68 and Pavon76 69 were mapped to RefSeq v1.0 52 , filtered and SNP called as described for the genotyping above and in 25 . Homozygous SNPs were retained if they had between 10 and 60 reads supporting the alternative allele and an allele frequency > = 0.8.…”
Section: Methodsmentioning
confidence: 99%
“…Paired-end whole-genome sequencing data for the Ae. tauschii reference accession AL8/78 26 69 were mapped to RefSeq v1.0 52 , filtered and SNP called as described for the genotyping above and in 25 . Homozygous SNPs were retained if they had between 10 and 60 reads supporting the alternative allele and an allele frequency > = 0.8.…”
Section: Methodsmentioning
confidence: 99%