2018
DOI: 10.1002/ece3.4380
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Unexpected prey of juvenile spotted scat (Scatophagus argus) near a wharf: The prevalence of fouling organisms in stomach contents

Abstract: A knowledge of fish diets can contribute to revealing the trophic role and ecological function of species in aquatic ecosystems. At present, however, there are no efficient or comprehensive methods for analyzing fish diets. In this study, we investigated the diets of juvenile Scatophagus argus collected near a wharf in Daya Bay, China, by dissection and high‐throughput sequencing (HTS) using the 18S rDNA V4 region. Microscopy disclosed large amounts of bryozoans and unrecognizable detritus. In contrast, HTS an… Show more

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Cited by 10 publications
(13 citation statements)
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“…By using metabarcoding technology, we were able to elucidate crane diets at greater detail than previously known. The improved knowledge might be due to the ability of metabarcoding to provide a more comprehensive perspective and more details on food sources than traditional methods [ 66 , 67 , 80 ]. Metabarcoding is able to detect a variety of smaller and softer bodied food items that are overlooked by microhistological methods [ 67 , 80 ].…”
Section: Discussionmentioning
confidence: 99%
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“…By using metabarcoding technology, we were able to elucidate crane diets at greater detail than previously known. The improved knowledge might be due to the ability of metabarcoding to provide a more comprehensive perspective and more details on food sources than traditional methods [ 66 , 67 , 80 ]. Metabarcoding is able to detect a variety of smaller and softer bodied food items that are overlooked by microhistological methods [ 67 , 80 ].…”
Section: Discussionmentioning
confidence: 99%
“…The improved knowledge might be due to the ability of metabarcoding to provide a more comprehensive perspective and more details on food sources than traditional methods [ 66 , 67 , 80 ]. Metabarcoding is able to detect a variety of smaller and softer bodied food items that are overlooked by microhistological methods [ 67 , 80 ]. It also enables the identification of food items at a higher taxonomic resolution [ 69 , 81 ].…”
Section: Discussionmentioning
confidence: 99%
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“…Mitochondrial D‐LOOP sequences were amplified from the DNA samples using nested polymerase chain reactions (PCRs) with four primers that were designed using the Primer Premier software (version 5.0; Lin et al., 2018): F1 (5ʹ‐TTAAAGCATCGGTCTTGTAA‐3ʹ), R1 (5ʹ‐ATAGTGGGGTATCTAATCCCAGTT‐3ʹ), F2 (5ʹ‐AGCACCGGTCTTGTAAACCG‐3ʹ), and R2 (5ʹ‐GGTGCGGRKACTTGCATGTRTAA‐3ʹ). The first PCR (10.0 μl) contained 5 μl 2× Ex Taq Mastermix Bufffer, 0.4 μl of upstream primer (F1; 10 µM), 0.4 μl of the downstream primer (R1; 10 µM), 0.4 μl of DNA template (100 ng/µl), and sufficient ddH 2 O to total 10.0 μl.…”
Section: Methodsmentioning
confidence: 99%
“…Mitochondrial D-LOOP sequences were amplified from the DNA samples using nested polymerase chain reactions (PCRs) with four primers that were designed using the Primer Premier software (version 5.0; Lin et al, 2018)…”
Section: Dna Extraction Polymerase Chain Reaction and Sequencingmentioning
confidence: 99%