Src homology 3 (SH3) domains are conserved modules which participate in protein interaction by recognizing proline-rich motifs on target molecules. To identify new SH3-containing proteins, we performed a two-hybrid screen with a proline-rich region of human SOS-1. One of the specific SOS-1 interacting clones that were isolated from a mouse brain cDNA library defines a new protein that was named amphiphysin 2 because of its homology to the previously reported amphiphysin. Amphiphysin 2 is expressed in a number of mouse tissues through multiple RNA transcripts. Here, we report the amino acid sequence of a brain form of amphiphysin 2 (BRAMP2) encoded by a 2.5-kilobase mRNA. BRAMP2 associates in vitro with elements of the endocytosis machinery such as ␣-adaptin and dynamin. On a biosensor surface, the BRAMP2/dynamin interaction appeared to be direct and partly dependent on a proline-rich sequence of dynamin. Association with dynamin was also observed in PC12 cells after cell stimulation with nerve growth factor, suggesting that amphiphysin 2 may be connected to receptor-dependent signaling pathways. This hypothesis is strengthened by the ability of BRAMP2 to interact with the p21 ras exchange factor SOS, in vitro, as a possible point of interconnection between the endocytic and signaling pathways.A limited set of protein modules mediates molecular interactions and underlies the diversity of intracellular signaling pathways. Among these modules, Src homology 3 (SH3) 1 domains were first identified as non-catalytic regions of 55-70 AA, present in signaling and cytoskeletal proteins (1). A common feature of SH3 domains is their ability to bind proline-rich sequences on target molecules. A SH3 domain is composed of a hydrophobic binding pocket with finely positioned aromatic residues and charged loops outside of this pocket that determine the specificity of the interaction with proline-rich motifs. Phage display or peptide library screenings with individual SH3 domains demonstrated the absence of a strict exclusivity for SH3 and proline-rich partners (2, 3). This feature may be the basis for the identification of new SH3-containing proteins.Human SOS-1 C terminus contains a multitude of intermingled proline-rich motifs. It was used as a "pseudo-degenerated" bait in search for new SH3 domains in a two-hybrid screen. Several SH3 domains were isolated, and one of them allowed us to identify a new protein, homologous to, but different from, amphiphysin (4), that was named amphiphysin 2. Amphiphysin is a strictly neuronal protein that plays a crucial role in the endocytosis of synaptic vesicles (5). A current hypothesis suggests that a ubiquitous homologue involved in general endocytosis should exist. We show here that this hypothesis is correct and incomplete. Amphiphysin 2 is expressed under several forms: a 2.0-kb transcript which is expressed almost ubiquitously and a 2.5-kb transcript that is brain-specific. The latter form was further characterized in vitro and in vivo. We show that the brain form of amphiphysin 2 (BRA...