Twenty-one progeny Hlnes derived from tssue cultures of two embryo sources of maize inbred strai A188were eamed for DNA methylaton changes. Total DNA was cut with the zomers Hpa H and Msp I and probed with 18 single-copy PstI genomic dones and two cDNA clones. Eight of these probes could detect both Increases and decreases in methylation. With these probes 39% ofthe families were found to contain an altered methylatlon pattern. AU changes represented a decrease In methylation. The other 12 probes could detect only increases in methylatlon; no methylation variation was seen with hese probes.
MATERIALS AND METHODSIn a previous study (35), R1 seed was produced in the following manner (see also Fig. 1). A plant of maize inbred strain A188 was selfed and two embryos (I and J) were induced to form embryogenic callus. The callus was maintained on modified Murashige-Skoog medium (36) for 7 months, at which time plants were regenerated (Ro) and grown to maturity in a glasshouse. R0-derived R1 seed produced by selfing these regenerated plants was used in this study. Nine R0-derived R1 families from embryo source I and 13 R0-derived R1 families from embryo source J were evaluated. The plants were grown for 4 weeks in a glasshouse. The above-ground portions offive plants from each family as well as 15 noncultured control plants were individually harvested and lyophilized. DNA was extracted by the cetyltrimethylammonium bromide extraction procedure (37). The DNA was incubated overnight with 3 units of restriction enzyme per microgram to ensure complete digestion. Hpa II was the methylation-sensitive restriction enzyme used to cut the DNA; the isoschizomer Msp I was used as a control when appropriate. Both enzymes recognize the sequence CCGG, although only Msp I will cut the sequence if the internal C is methylated. The DNA was blotted to Immobilon-N membrane according to the manufacturer's (Millipore) procedures. The blots were probed with 18 single-copy Pst I genomic clones [UMC 15,31,34, 54, 60, 67, 80, 84, 89, 102, 103, and 137-all restriction fragment length polymorphism (RFLP) probes from the University of Missouri-Columbiaand BNL 3. 04, 5.09, 5.62, 5.71, 6.25, and 12.30-RFLP probes from Brookhaven National Laboratory] and two cDNA clones (sucrose synthase 1 and alcohol dehydrogenase 1). Eight of the 10 chromosomes are represented by these probes. Hybridizations were carried out at 65°C using 5x standard saline citrate and no formamide. Stringency washes contained 0.1 x standard saline citrate and were done at 65°C for 1 hr.In the summer of 1990, R1 families were selfed to produce R2 plants. Selfed progeny offive R1 families were analyzed as *Present address: