Permeabilization of the Gram negative bacterial outer membrane (OM) by antimicrobial peptides (AMPs) is the initial step enabling access of the AMP to the cytoplasmic membrane. We present a new single-cell, time-resolved fluorescence microscopy assay that reports on the permeabilization of the E. coli OM to small molecules, with time resolution of 3 sec or better. When the profluorophore JF646 (702 Da) crosses the outer membrane (OM) and gains access to the periplasm, it binds to localized HaloTag protein (34 kDa) and fluoresces in a characteristic hollow spatial pattern. Previous work used the much larger periplasmic GFP (27 kDa) probe, which reports on OM permeabilization to globular proteins. We test the assay on three cationic agents: the Gellman random β-peptide copolymer MM63:CHx37, the human AMP LL-37, and the synthetic hybrid AMP CM15. These results combined with previous work suggest a unifying sequence of OM and cytoplasmic membrane (CM) events that may prove commonplace in the attack of cationic peptides on Gram negative bacteria. The peptide initially induces gradual OM permeabilization to small molecules, likely including the peptide itself. After a lag time, abrupt permeabilization of the OM, abrupt re-sealing of the OM, and abrupt permeabilization of the CM (all to globular proteins) occur in rapid sequence. We propose a mechanism based on membrane curvature stress induced by time-dependent differential binding of peptide to the outer leaflet of the OM and CM. The results provide fresh insight into the critical OM permeabilization step leading to a variety of damaging downstream events.