Salinivibrio costicola subsp. vallismortis subsp. nov., a halotolerant facultative anaerobe from Death Valley, and emended description of Salinivibrio costicola.

Huang, C.; Garcia, Jean‐Louis; Patel, Bharat K. C.; Cayol, Jean‐Luc; Baresi, Larry; Mah, Robert A.

doi:10.1099/00207713-50-2-615

Cited by 46 publications

(24 citation statements)

References 30 publications

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“…alcaliphilus DSM 16359 T as reported by Huang et al (2000). However, strain ND1-1 T did not show Mellado et al (1996) and Huang et al (2000). DData from Romano et al (2005).…”

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confidence: 78%

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Salinivibrio siamensis sp. nov., from fermented fish (pla-ra) in Thailand

Chamroensaksri

Tanasupawat

Akaracharanya

et al. 2009

INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLO

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A Gram-negative, facultatively anaerobic, moderately halophilic bacterium, strain ND1-1 T , was isolated from fermented fish (pla-ra) in Thailand. The cells were curved rods, motile and nonendospore-forming. The novel strain grew optimally at 37 6C, at pH 8 and in the presence of 9"10 % (w/v) NaCl. The predominant respiratory lipoquinone was Q-8. The major cellular fatty acids were C 16 : 0 and C 12 : 0 . Polar lipid analysis revealed the presence of phosphatidylethanolamine, phosphatidylglycerol and diphosphatidylglycerol. The DNA G+C content was 49.0 mol%. Comparative 16S rRNA gene sequence analyses indicated that strain ND1-1 T was closely related to Salinivibrio costicola, which comprises three subspecies, and Salinivibrio proteolyticus with gene sequence similarities of 98.3-98.6 %. Strain ND1-1 T showed low levels of DNA-DNA relatedness with S. costicola subsp. costicola JCM 15095 T (33.2 %), S. costicola subsp. alcaliphilus DSM 16359 T (38.4 %), S. costicola subsp. vallismortis JCM 15096 T (59.7 %), and S. proteolyticus AF-2004 T (42.1 %). On the basis of the physiological and biochemical characteristics and the molecular data presented, strain ND1-1 T should be classified as a novel species of the genus Salinivibrio for which the name Salinivibrio siamensis sp. nov. is proposed. The type strain is ND1-1 T (5JCM 14472 T 5PCU 301 T 5TISTR 1810 T ).The genus Salinivibrio is included in the family Vibrionaceae, belonging to the class Gammaproteobacteria of the phylum Proteobacteria. This genus was created for Vibrio costicola based on the significant phenotypic and genotypic differences between this species and other species of the genus Vibrio (Mellado et al., 1996). At present, the genus comprises two species, Salinivibrio costicola subsp. costicola (Smith, 1938;Garcia et al., 1987), S. costicola subsp. vallismortis (Huang et al., 2000), S. costicola subsp. alcaliphilus (Romano et al., 2005) and Salinivibrio proteolyticus (Amoozegar et al., 2008). Members of the genus Salinivibrio are moderately halophilic bacteria which are distributed in salted meats, brines and hypersaline environments and grow in the presence of 0-20 % NaCl. During our investigation into halophilic bacteria in fermented fish in Thailand, strains of Lentibacillus juripiscarius and Lentibacillus halophilus from fish sauce (Namwong et al., 2005; Tanasupawat et al., 2006), Lentibacillus kapialis from fermented shrimp paste (Pakdeeto et al., 2007) and Piscibacillus salipiscarius from fermented fish (Tanasupawat et al., 2007) have been reported. In this paper, a Salinivibrio-like, moderately halophilic bacterium, strain ND1-1 T , isolated from fermented fish (pla-ra), is described based on phenotypic, chemotaxonomic and genotypic characteristics, including DNA-DNA relatedness and 16S rRNA gene sequence analyses.Strain ND1-1 T was isolated from a fermented fish product, pla-ra, which was collected from a market in Nakornnayok province, Thailand. Pla-ra contains 7.8-17.9 % NaCl (w/v) and has a pH of 4.3-6.2 (Phithakpol et al., 1995). The Abbr...

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“…alcaliphilus DSM 16359 T as reported by Huang et al (2000). However, strain ND1-1 T did not show Mellado et al (1996) and Huang et al (2000). DData from Romano et al (2005).…”

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confidence: 78%

“…costicola (Smith, 1938;Garcia et al, 1987), S. costicola subsp. vallismortis (Huang et al, 2000), S. costicola subsp. alcaliphilus (Romano et al, 2005) and Salinivibrio proteolyticus (Amoozegar et al, 2008).…”

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confidence: 99%

Salinivibrio siamensis sp. nov., from fermented fish (pla-ra) in Thailand

Chamroensaksri

Tanasupawat

Akaracharanya

et al. 2009

INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLO

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“…costicola (Mellado et al, 1996), S. costicola subsp. vallismortis (Huang et al, 2000) and S. costicola subsp. alcaliphilus (Romano et al, 2005).…”

unclassified

“…S. costicola, formerly classified as Vibrio costicola, was first described by Smith (1938) and then included in editions of Bergey's Manual and the Approved Lists of Bacterial Names (Skerman et al, 1980). In 1987, Garcia and others amended the description of V. costicola (Garcia et al, 1987) and, finally, Huang et al (2000) described S. costicola subsp. vallismortis and further amended the description of S. costicola.…”

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confidence: 99%

Salinivibrio proteolyticus sp. nov., a moderately halophilic and proteolytic species from a hypersaline lake in Iran

Amoozegar

Schümann

Hajighasemi

et al. 2008

INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLO

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“…Description of Aliivibrio salmonicida (Egidius et al 1986) Thompson et al (2002) and Huang et al (2000). +, ¢75 % of species positive; -, ,25 % of species positive; d, different reactions given by different species.…”

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confidence: 99%

Reclassification of Vibrio fischeri, Vibrio logei, Vibrio salmonicida and Vibrio wodanis as Aliivibrio fischeri gen. nov., comb. nov., Aliivibrio logei comb. nov., Aliivibrio salmonicida comb. nov. and Aliivibrio wodanis comb. nov.

Urbanczyk

Ast

Higgins

et al. 2007

International Journal of Systematic and Evolutionary Microbiology

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Four closely related species, Vibrio fischeri, Vibrio logei, Vibrio salmonicida and Vibrio wodanis, form a clade within the family Vibrionaceae; the taxonomic status and phylogenetic position of this clade have remained ambiguous for many years. To resolve this ambiguity, we tested these species against other species of the Vibrionaceae for phylogenetic and phenotypic differences. Sequence identities for the 16S rRNA gene were ≥97.4 % among members of the V. fischeri group, but were ≤95.5 % for members of this group in comparison with type species of other genera of the Vibrionaceae (i.e. Photobacterium and Vibrio, with which they overlap in G+C content, and Enterovibrio, Grimontia and Salinivibrio, with which they do not overlap in G+C content). Combined analysis of the recA, rpoA, pyrH, gyrB and 16S rRNA gene sequences revealed that the species of the V. fischeri group form a tightly clustered clade, distinct from these other genera. Furthermore, phenotypic traits differentiated the V. fischeri group from other genera of the Vibrionaceae, and a panel of 13 biochemical tests discriminated members of the V. fischeri group from type strains of Photobacterium and Vibrio. These results indicate that the four species of the V. fischeri group represent a lineage within the Vibrionaceae that is distinct from other genera. We therefore propose their reclassification in a new genus, Aliivibrio gen. nov. Aliivibrio is composed of four species: Aliivibrio fischeri comb. nov. (the type species) (type strain ATCC 7744T =CAIM 329T =CCUG 13450T =CIP 103206T =DSM 507T =LMG 4414T =NCIMB 1281T), Aliivibrio logei comb. nov. (type strain ATCC 29985T =CCUG 20283T =CIP 104991T =NCIMB 2252T), Aliivibrio salmonicida comb. nov. (type strain ATCC 43839T =CIP 103166T =LMG 14010T =NCIMB 2262T) and Aliivibrio wodanis comb. nov. (type strain ATCC BAA-104T =NCIMB 13582T =LMG 24053T).

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Salinivibrio costicola subsp. vallismortis subsp. nov., a halotolerant facultative anaerobe from Death Valley, and emended description of Salinivibrio costicola.

Cited by 46 publications

References 30 publications

Salinivibrio siamensis sp. nov., from fermented fish (pla-ra) in Thailand

Salinivibrio siamensis sp. nov., from fermented fish (pla-ra) in Thailand

Salinivibrio proteolyticus sp. nov., a moderately halophilic and proteolytic species from a hypersaline lake in Iran

Reclassification of Vibrio fischeri, Vibrio logei, Vibrio salmonicida and Vibrio wodanis as Aliivibrio fischeri gen. nov., comb. nov., Aliivibrio logei comb. nov., Aliivibrio salmonicida comb. nov. and Aliivibrio wodanis comb. nov.

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