2016
DOI: 10.3389/fpls.2016.00721
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Abstract: The root nodule symbiosis (RNS) between legume plants and rhizobia is the most efficient and productive source of nitrogen fixation, and has critical importance in agriculture and mesology. Soybean (Glycine max), one of the most important legume crops in the world, establishes a nitrogen-fixing symbiosis with different types of rhizobia, and the efficiency of symbiotic nitrogen fixation in soybean greatly depends on the symbiotic host-specificity. Although, it has been reported that rhizobia use surface polysa… Show more

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Cited by 40 publications
(52 citation statements)
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References 51 publications
(64 reference statements)
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“…Our group previously sequenced the A. apis-infected honeybee larval guts using the Illumina HiSeq platform, and de novo assembled and annotated a transcriptome using the short reads from A. apis [22]. Transcriptome analysis is a powerful tool for unraveling the relationships between genotype and phenotype, allowing a better understanding of the underlying pathways and molecular mechanisms regulating metabolism, growth and development, and the immune system [21,3335]. Based on the previously assembled transcriptome, we conducted a further comprehensive transcriptomic investigation of A. apis infecting larvae from the western honeybee and eastern honeybee [23–24].…”
Section: Discussionmentioning
confidence: 99%
“…Our group previously sequenced the A. apis-infected honeybee larval guts using the Illumina HiSeq platform, and de novo assembled and annotated a transcriptome using the short reads from A. apis [22]. Transcriptome analysis is a powerful tool for unraveling the relationships between genotype and phenotype, allowing a better understanding of the underlying pathways and molecular mechanisms regulating metabolism, growth and development, and the immune system [21,3335]. Based on the previously assembled transcriptome, we conducted a further comprehensive transcriptomic investigation of A. apis infecting larvae from the western honeybee and eastern honeybee [23–24].…”
Section: Discussionmentioning
confidence: 99%
“…Seeds of soybean Tianlong No.1 (stored in our lab) were surface-sterilized, germinated and grown on moistened filter paper in a greenhouse with a 16/8 h day/night cycle and 70% relative humidity (RH) for 2–3 d at 28°C (Yuan et al, 2016). For nodulation experiments, the germinated soybean seeds were grown in pots filled with sterilized vermiculite and sand (1:1) supplemented with half-strength B&D medium in a chamber with a 16/8 h day/night cycle at 28°C for 4–5 d before inoculation with rhizobium strain 113-2 (stored in our lab).…”
Section: Methodsmentioning
confidence: 99%
“…For RNA isolation, soybean roots from CK and 113-2 inoculated groups were collected with three biological replicates at five different time points [0.5 h, 7–24 h (mixture of 7 h and 24 h), 5, 16, and 21 d of post inoculation] (Yuan et al, 2016) and frozen at −80°C, and soybean nodules from CK and 113-2 inoculated groups were collected with three biological replicates at five important nodule development time points (12, 30, 42, 60, and 84 d of post inoculation) and frozen at −80°C.…”
Section: Methodsmentioning
confidence: 99%
“…The molecular mechanisms underlying the physiological adaptation of rhizobia in the root nodules have so far been mainly studied in α-rhizobial symbiosis model systems. Several studies have relied on functional genomics technologies like transcriptomics, proteomics and metabolomics, and comparative genomics [11,12,13,14,15,16,17,18,19,20]. …”
Section: Introductionmentioning
confidence: 99%