Search citation statements

Order By: Relevance

Paper Sections

Select...
3
2

Citation Types

0
10
0

Year Published

2021
2021
2023
2023

Publication Types

Select...
7
3

Relationship

0
10

Authors

Journals

citations
Cited by 15 publications
(10 citation statements)
references
References 78 publications
0
10
0
Order By: Relevance
“…In the BEAST 2 (UCLN) phylogenies the relationship between speciation and molecular rates is inverted, giving a negative correlation between clade sizes and branch lengths. This could be related to the fact that lineages with many speciation events have higher variance in branch lengths in the BEAST 2 (UCLN) reconstruction [ 101 ] which means their total length could be more strongly constrained by the node time (tree) prior. Conversely, for the PAML (ACLN) and PAML (UCLN) reconstructed trees, we found significant positive relationships between inferred branch lengths and clade size for all three models, even the Unlinked model where speciation rates and substitution rates are not positively associated.…”
Section: Discussionmentioning
confidence: 99%
“…In the BEAST 2 (UCLN) phylogenies the relationship between speciation and molecular rates is inverted, giving a negative correlation between clade sizes and branch lengths. This could be related to the fact that lineages with many speciation events have higher variance in branch lengths in the BEAST 2 (UCLN) reconstruction [ 101 ] which means their total length could be more strongly constrained by the node time (tree) prior. Conversely, for the PAML (ACLN) and PAML (UCLN) reconstructed trees, we found significant positive relationships between inferred branch lengths and clade size for all three models, even the Unlinked model where speciation rates and substitution rates are not positively associated.…”
Section: Discussionmentioning
confidence: 99%
“…It is important to note that for the NEMo analysis, as for most macroevolutionary analyses, we have assumed that the phylogeny has accurate topology and provides an approximate scaling of evolutionary events in time. Clearly, phylogenetic estimates of either topology or the timing of evolutionary events are not error-free (Bromham et al 2018; Guindon 2020; Nie et al 2019). In particular, uncertainty or bias in branch length estimates arising from imperfect characterisation of molecular rates over time may have a non-trivial impact on macroevolutionary inference (Duchêne et al 2017).…”
Section: Discussionmentioning
confidence: 99%
“…In the BEAST 2 (UCLN) phylogenies the relationship between speciation and molecular rates is inverted, giving a negative correlation between clade sizes and branch lengths. This could be related to the fact that lineages with many speciation events have higher variance in branch lengths in the BEAST 2 (UCLN) reconstruction (102) which means their total length could be more strongly constrained by the node time (tree) prior. Conversely, for the PAML (ACLN) and PAML (UCLN) reconstructed trees, we found significant positive relationships between inferred branch lengths and clade size for all three models, even the Unlinked model where speciation rates and substitution rates are not positively associated.…”
Section: Discussionmentioning
confidence: 99%