Biologically functional clade C envelope (Env) glycoproteins from the chronically (donor) and newly (recipient) infected partners of four heterosexual transmission pairs in Zambia were cloned and characterized previously. In each case, the donor viral quasispecies contained Envs that were resistant to autologous neutralization by contemporaneous plasma, while the recipient Envs were sensitive to neutralizing antibodies in this donor plasma sample. The donor Envs also varied in length, glycosylation, and amino acid sequence of the V1V2 hypervariable domain of gp120, while the recipient Envs were much more homogeneous. To assess the contribution of V1V2 to the neutralization phenotype of the donor Envs, V1V2 domains from neutralization-sensitive recipient Envs were replaced with donor V1V2 domains, and the autologous neutralization sensitivities of the chimeric Envs were evaluated using a virus-pseudotyping assay. Long donor V1V2 domains regulated sensitivity to autologous neutralization, although the effect was dependent on the Env background. Short donor V1V2 domains did not confer neutralization resistance. Primary sequence differences in V2 were also found to influence neutralization sensitivity in one set of recipient Envs. The results demonstrate that expansion of the V1V2 domain is one pathway to escape from autologous neutralization in subtype C Envs. However, V1V2-independent mechanisms of resistance also exist, suggesting that escape is multifaceted in chronic subtype C infection.In the course of 25 years, human immunodeficiency virus type 1 (HIV-1), the causative agent of AIDS, has infected more than 60 million people worldwide (45). Developing countries have been severely impacted by the pandemic, and it is well recognized that viral subtypes that are genetically distinct from those in the United States and Europe circulate in those regions (30,36). Recently, there has been a movement toward the characterization of viruses representative of globally predominant subtypes, such as A and C, especially with respect to the envelope (Env) glycoproteins (1,7,8,27,49,52), which can be as much as 35% divergent between viral clades (11). This extraordinary genetic diversity poses a significant impediment to vaccine development, in which a major goal is induction of broad and potent neutralizing antibodies (NAb) (22). It is therefore important to characterize the mechanisms of escape from autologous neutralization for viruses representative of globally predominant clades, as they could be relevant for the selection and development of immunogens.The HIV-1 genome encodes two glycoproteins; the surface subunit gp120 facilitates interactions with receptor molecules, while the transmembrane subunit gp41 anchors the Env complex in the viral membrane and mediates fusion with the host cell membrane (16). HIV-1 gp120 contains five "hypervariable" domains that tolerate sequence heterogeneity, and especially in the case of the first two hypervariable domains (V1V2), accommodate dramatic insertions and deletions and various ...