2003
DOI: 10.1002/anie.200390233
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NMR Spectroscopy Techniques for Screening and Identifying Ligand Binding to Protein Receptors

Abstract: Binding events of ligands to receptors are the key for an understanding of biological processes. Gaining insight into protein-protein and protein-ligand interactions in solution has recently become possible on an atomic level by new NMR spectroscopic techniques. These experiments identify binding events either by looking at the resonance signals of the ligand or the protein. Ideally, both techniques together deliver a complete picture of ligand binding to a receptor. The approaches discussed in this review all… Show more

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Cited by 942 publications
(632 citation statements)
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“…Although the fluorescence-based assay is a robust technique to search for very potent inhibitors, it becomes more ambiguous in detecting weaker ligands (Ͼ100 M), possibly due to interference introduced by test compounds (normally used at high concentration) in the spectrophotometric assay. For this reason, we relied on a NMR-based enzymatic assay, which is unlikely to lead to false positives (16)(17)(18)(19)(20)(21)(22)(23). Recently, the use of 19 F-1D NMR to detect enzyme activity and inhibition both in proteases and kinases has been reported (22).…”
Section: Resultsmentioning
confidence: 99%
“…Although the fluorescence-based assay is a robust technique to search for very potent inhibitors, it becomes more ambiguous in detecting weaker ligands (Ͼ100 M), possibly due to interference introduced by test compounds (normally used at high concentration) in the spectrophotometric assay. For this reason, we relied on a NMR-based enzymatic assay, which is unlikely to lead to false positives (16)(17)(18)(19)(20)(21)(22)(23). Recently, the use of 19 F-1D NMR to detect enzyme activity and inhibition both in proteases and kinases has been reported (22).…”
Section: Resultsmentioning
confidence: 99%
“…To obtain a relevant chemical shift difference, the absolute value of the slope obtained through linear regression between chemical shift and diffusion coefficient (ranging between 178.5 µm²s -1 and 436.3 µm²s -1 ) was multiplied with the difference in diffusion coefficient over the entire titration experiment. The 1 H/ 15 N average chemical shift was calculated [29] as δav = δ( 1 H)+ δ( 15 N)/5, while the 1 H/ 13 C average was calculated as δav = δ( 1 H)+ δ( 13 C)/2 (supporting information).…”
Section: Methodsmentioning
confidence: 99%
“…We synthesized 49 compounds related to BSc2463 to confirm the lead structure, to build up a structure-activity relationship (SAR), and to improve the biological activity. In addition, we analyzed one of the most active compounds (BSc3094) by saturation transfer difference NMR (STD-NMR) (12) to determine the interaction mode with tau protein. Finally, we tested the activity and toxicity of the compounds in a cell model of tau pathology (13) and show that the most active compounds are well-tolerated by cells.…”
mentioning
confidence: 99%