Background: Rodent Cecal Ligation and Puncture (CLP) models, which mimic sepsis in humans. Gauges needle size during CLP related to cytokine storm, inflammation and organ failure.This study focus on precise and low cost various biochemical markers to trace sepsis severity in cardiopulmonary system and blood after CLP with gauge needle size -18 (G-18) and -21 (G-21) in rats.Results: For the purpose of this study, 18 male Wistar rats were assigned into three groups: CLP procedure with G-18 needle, CLP procedure with G-21 and sham. Following the procedure, oxidative stress markers, blood markers, apoptosis indicators, gene expression of autophagy and cellular hypoxia and histopathological assessments were carried out in the cardiopulmonary tissue and blood 24 hours after CLP. All measured factors were increased in both G-18 and G-21 gauge groups in comparison with the sham. Moreover, 24 hours after CLP, inflammatory markers, blood profile, lactate level, pro-inflammatory cytokines, caspases, gene expression of cellular homeostasis and autophagy in samples were more pronouncedly increased in the G-18 group in comparison with the G-21. Conclusions: This experiment provides a significant association of inflammation and cytokine storm with anti-oxidant property, apoptotic condition and gene expression of tissue and blood infection related to severity organ damage were increased with G-18 compare to G-21. Our study has identified cost-effective indicators to evaluate organ failure during sepsis. This should be considered by all investigators using G-18 in comparison with G-21 to induce severe sepsis.