The pore domain of voltage-gated potassium (Kv) channels consists of transmembrane helices S5 and S6, the turret, the pore helix, the selectivity filter, and the loop preceding S6, with a tertiary reentrant structure between S5 and S6. Using biogenic intermediates, mass tagging (pegylation), and a molecular tape measure, we explored the possibility that the first stages of pore formation occur prior to oligomerization of the transmembrane core. Pegylation of introduced cysteines shows that the pore helix, but not the turret, forms a compact secondary structure in the terminal 20 Å of the ribosomal tunnel. We assessed the tertiary fold of the pore loop in monomeric constructs by determining the relative accessibilities of select cysteines using the kinetics of pegylation. Turret residues are accessible at the extracellular surface. In contrast, pore helix residues are less accessible. All-atom molecular dynamics simulations of a single Kv monomer in a solvated lipid membrane indicate that secondary and tertiary folds are stable over 650 ns. These results are consistent with acquisition of a tertiary reentrant pore architecture at the monomer stage of Kv biogenesis and begin to define a plausible sequence of folding events in the formation of Kv channels.T he pore of a selective potassium channel has evolved to be highly selective and rapidly conducting. These permeation properties derive from the exquisitely precise architecture of the tetrameric channel protein (1). Voltage-gated potassium (Kv) channels have six transmembrane segments, S1-S6 and a cytosolic T1 tetramerization domain. The pore region is composed of S5, S6, and an intervening pore loop consisting of a turret, the pore helix, the selectivity filter, and a pre-S6 loop (Fig. 1). Reentry of the pore loop between S5 and S6 is necessary to position the selectivity filter facing both intra-and extracellular aqueous vestibules. The pore loop is structurally highly conserved among all ion channels. Folding defects in this region will lead to channelopathies. For example, mutations in this region cause long QT syndrome and can be fatal (2, 3). Folding of Kv channels, as with all proteins, begins as early as the birth of the nascent peptide attached to the ribosome and continues during its tenure in the endoplasmic reticulum (ER) (4-7). Yet, we know little regarding the sequence of events responsible for the critical folding of the pore itself, e.g., when are the secondary and tertiary folds that define the structure of the reentrant pore loop acquired?Here, we explore the possibility that pore structure forms early in biogenesis, in the monomer Kv1.3 channel protein. Fig. 1 (dashed circle) delineates the secondary and tertiary architecture probed in this study. Using a cysteine scan of the pore helix and turret region in a nascent (attached to the ribosome) Kv1.3 and a mass-tagging strategy, we demonstrate that compaction of the pore helix occurs in the distal portion of the ribosomal tunnel near the exit port. Using the kinetics of modification of cysteine...