Bafilomycin A 1 is a specific inhibitor of the vacuolar-ATPase (V-ATPase), which is responsible for pH homeostasis of the cell and for the acidification of endosomes. Bafilomycin A 1 has been commonly used as a method of inhibition of infection by viruses known or suspected to follow the path of receptor-mediated endocytosis and low-pH-mediated membrane fusion. The exact method of entry for Sindbis virus, the prototype alphavirus, remains undetermined. Sindbis virus (SV) is the prototype virus of the genus Alphavirus in the family Togaviridae. It consists of two nested protein shells with Tϭ4 icosahedral symmetry. The inner shell consists of 240 copies of the capsid protein (C) and encloses the singlestranded positive-sense RNA genome of the virus. The outer protein shell is a lattice of 240 copies of each of the two structural proteins E1 and E2 (1, 40). Evidence suggests E1 forms the base of the structural lattice, and E2 is responsible for receptor recognition and binding (33). Between the two protein shells exists a host-derived lipid bilayer (1,40).When SV infects a cell, the positive-sense RNA must first be translated and transcribed into a negative-sense RNA template. Translation of the positive-sense RNA results in the four nonstructural proteins (47). The uncleaved P123 and nsP4 form the minus-strand RNA replicase, which translates the positive-sense RNA genome into a negative-sense RNA template. P123 is cleaved into three separate proteins (nsP1, nsP2, and nsP3) that form the plus-strand RNA replicase with nsP4.