Improvements in growth performance and health are key goals in broiler chicken production. Inclusion of prebiotic galacto-oligosaccharides in broiler feed enhanced the growth rate and feed conversion of chickens relative to a calorie-matched control diet. Comparison of the cecal microbiota identified key differences in abundance of Lactobacillus spp. Increased levels of L. johnsonii in GOS-fed juvenile birds at the expense of L. crispatus was linked to improved performance (growth rate and market weight). Investigation of the innate immune responses highlighted increases of ileal and cecal IL-17A gene expression counterposed to a decrease in IL-10 and IL-17F. Quantification of the autochthonous Lactobacillus ssp. revealed a correlation between bird performance and L. johnsonii abundance. Shifts in the cecal populations of key Lactobacillus spp. of juvenile birds primed intestinal innate immunity without harmful pathogen challenge.
IMPORTANCEImprovements in the growth rate of broiler chickens can be achieved through dietary manipulation of the naturally occurring bacterial populations whilst mitigating the withdrawal of antibiotic growth promoters. Prebiotic galacto-oligosaccharides (GOS) are manufactured as a by-product of dairy cheese production, which can be incorporated in the diets of juvenile chickens to improve their health and performance. This study investigates the key mechanisms behind this progression and pin points L. johnsonii as a key species that facilitates the enhancements in growth rate and gut health. It also relates the role of the innate immune system in the response to the GOS diet.in the PCR reaction and converted into genome copy number per gram of cecal content based on the mass of cecal material and elution volume applied for DNA extraction.Data and Statistical Analysis. For the microbiota -diversity analysis Bray Curtis distances were tested for significance using AMOVA implemented within Mothur (79). Linear discriminant analysis effect size (LEfSe) was used to identify differentially abundant OTUs (82) and implemented within Mothur (79). Data processing and ordination were performed using R (R Development Core Team, 2013. R: A language and environment for statistical computing. R Foundation for Statistical Computing, Vienna, Austria. ISBN 3-900051-07-0; URL http://www.R-project.org ; 83). With the exception of Figure S2 all figures were drawn using R version 3.5.3 (2019-03-11) in Rstudio 1.1 (84,85). R scripts used to draw figures are available at: https://github.com/PJRichards/Richards_GOS_broiler. Significance tests of heterophil counts, villus and crypt measurements were performed using single-factor ANOVA with p < 0.05 used as the level significance. Non-normally distributed gene expression data were compared using the non-parametric Kruskal-Wallis test. Data Availability. The genome DNA sequences of L. crispatus DC21.1 appear in the NCBI database under the accession numbers CP039266-CP039267.The genome DNA sequences L. johnsonii DC22.2 appear in the NCBI database under the access...