Uncoating of clathrin-coated vesicles requires the Jdomain protein auxilin for targeting hsc70 to the clathrin coats and for stimulating the hsc70 ATPase activity. This results in the release of hsc70-complexed clathrin triskelia and concomitant dissociation of the coat. To understand the complex role of auxilin in uncoating and clathrin assembly in more detail, we analyzed the molecular organization of its clathrin-binding domain (amino acids 547-813). CD spectroscopy of auxilin fragments revealed that the clathrin-binding domain is almost completely disordered in solution. By systematic mapping using synthetic peptides and by site-directed mutagenesis, we identified short peptide sequences involved in clathrin heavy chain and AP-2 binding and evaluated their significance for the function of auxilin. Some of the binding determinants, including those containing sequences 674 DPF and 636 WDW, showed dual specificity for both clathrin and AP-2. In contrast, the two DLL motifs within the clathrin-binding domain were exclusively involved in clathrin binding. Surprisingly, they interacted not only with the N-terminal domain of the heavy chain, but also with the distal domain. Moreover, both DLL peptides proved to be essential for clathrin assembly and uncoating. In addition, we found that the motif 726 NWQ is required for efficient clathrin assembly activity. Auxilin shares a number of proteinprotein interaction motifs with other endocytic proteins, including AP180. We demonstrate that AP180 and auxilin compete for binding to the ␣-ear domain of AP-2. Like AP180, auxilin also directly interacts with the ear domain of -adaptin. On the basis of our data, we propose a refined model for the uncoating mechanism of clathrin-coated vesicles.Clathrin-coated vesicles are involved in numerous membrane transport processes. After their formation, they rapidly shed their protein coats to allow fusion of the vesicle membranes with endosomes and to recycle the coat components. The disassembly of the clathrin coat is mediated by the molecular chaperone hsc70 and requires a cofactor of the DnaJ protein family known as auxilin (1). Auxilin is a neuron-specific protein involved in the removal of the clathrin coat from endocytosed synaptic vesicle membranes and thus in the recycling of synaptic vesicles (1-3), whereas the homolog auxilin-2, also referred to as cyclin G-associated kinase, is more broadly distributed (4, 5). Both proteins contain a C-terminal J-domain preceded by a centrally located clathrin-binding domain and an N-terminal phosphatase-and tensin-like domain with unknown function. In addition to these domains, auxilin-2 also possesses an N-terminal Ark-type kinase domain that has been shown to autophosphorylate auxilin-2 and to phosphorylate the -subunit of the adaptor protein complexes AP-1 and AP-2 (4).According to the current model for the uncoating of clathrincoated vesicles, it is believed that auxilin first binds to clathrin coats and then recruits hsc70 in an ATP-dependent reaction via its J-domain. The interacti...