Historical ecology and current status of the European hare
            <i>Lepus europaeus</i>
            in South America: a new species in new countries

Jaksic, Fabián M.

doi:10.1080/01650521.2023.2217064

Cited by 5 publications

(3 citation statements)

References 116 publications

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“…Preprint version 3 of this article has been peer-reviewed and recommended by Peer Community In Genomics (https://doi.org/10. 1101/2023 Hollox, 2024).…”

Section: Acknowledgementsmentioning

confidence: 99%

“…The brown hare (Lepus europaeus Pallas), also known as the European hare, is a widespread species in the western parts of Eurasia (Bock, 2020). Besides its native range, the brown hare has been introduced to numerous regions, including the British Isles, the Falkland Islands, Canada, South America, Australia and New Zealand (Petrovan, 2013;Jaksic, 2023). In many places the brown hare is regarded as an invasive species and a threat to the local ecosystems (Stott, 2003) or native species (Reid, 2011).…”

Section: Introductionmentioning

confidence: 99%

See 1 more Smart Citation

High quality genome assembly of the brown hare (Lepus europaeus) with chromosome-level scaffolding

Michell,

Collins,

Laine

et al. 2024

Peer Community Journal

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“…Preprint version 3 of this article has been peer-reviewed and recommended by Peer Community In Genomics (https://doi.org/10. 1101/2023 Hollox, 2024).…”

Section: Acknowledgementsmentioning

confidence: 99%

Section: Introductionmentioning

confidence: 99%

High quality genome assembly of the brown hare (Lepus europaeus) with chromosome-level scaffolding

Michell,

Collins,

Laine

et al. 2024

Peer Community Journal

View full text Add to dashboard Cite

show abstract

“…The brown hare ( Lepus europaeus Pallas), also known as the European hare, is a widespread species in the western parts of Eurasia (Bock, 2020). Besides its native range, the brown hare has been introduced to numerous regions, including the British Isles, the Falkland Islands, Canada, South America, Australia and New Zealand (Jaksic, 2023; Petrovan, 2013). In many places the brown hare is regarded as an invasive species and a threat to the local ecosystems (Stott, 2003) or native species (Reid, 2011).…”

Section: Introductionmentioning

confidence: 99%

High quality genome assembly of the brown hare (Lepus europaeus) with chromosome-level scaffolding

Michell,

Collins,

Laine

et al. 2023

Preprint

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Here we present a high-quality genome assembly of the mountain hare (Lepus timidusL.), based on a fibroblast cell line of a male specimen from Ilomantsi, Eastern Finland. The mountain hare represents the first Finnish contribution to the European Reference Genome Atlas pilot effort to generate reference genomes for European biodiversity.The genome was assembled using 25X PacBio HiFi sequencing data and scaffolded utilizing a Hi-C chromosome structure capture approach. After manual curation, the assembled genome length was 2,930,972,003 bp with N50 125.8Mb. 93.16% of the assembly could be assigned to 25 identified chromosomes (23 autosomes plus X and Y), matching the published karyotype. The chromosomes were named according to size. The genome has a high degree of completeness based on the BUSCO score (mammalia_odb10 database), Complete: 96.1% [Single copy: 93.1%, Duplicated: 3.0%], Fragmented 0.8%, and Missing 2.9%. The mitochondrial genome of the cell line was sequenced and assembled separately.Compared to the previous pseudoreference genome ofL. timidusssp.hibernicusBell, assembled using the rabbit genome, this new reference genome represents the nominal subspecies and the species-specific chromosomal conformation. In addition to providing a useful comparison for population studies, the genome can offer insight into the chromosomal evolution among Glires in general and Lagomorpha in particular. The chromosomal assembly of the genome also demonstrates that the cell line has not gone through karyotypic changes during culture.

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The ecological roles of the European rabbit in the Magellanic/Fuegian ecosystem of southernmost Chile

Mann-Vollrath,

Correa-Cuadros,

Ávila-Thieme

et al. 2024

Sci Rep

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Historical ecology and current status of the European hare Lepus europaeus in South America: a new species in new countries

Cited by 5 publications

References 116 publications

High quality genome assembly of the brown hare (Lepus europaeus) with chromosome-level scaffolding

High quality genome assembly of the brown hare (Lepus europaeus) with chromosome-level scaffolding

High quality genome assembly of the brown hare (Lepus europaeus) with chromosome-level scaffolding

The ecological roles of the European rabbit in the Magellanic/Fuegian ecosystem of southernmost Chile

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