“…Contig sequences were aligned to raw data using BWA (Li & Durbin, ) and placed into taxonomic bins with MetaBat2 (Kang, Froula, Egan, & Wang, ) using a minimum contig length of 2,000 bp. The comparison and dereplication of recovered genomes bins were completed using dRep (Olm, Brown, Brooks, & Banfield, ) with minimum primary Average Nucleotide Identity (ANI) 60% (Varghese et al., ) and minimum secondary ANI 95% (Jain, Rodriguez‐R, Phillippy, Konstantinidis, & Aluru, ). CheckM (Parks, Imelfort, Skennerton, Hugenholtz, & Tyson, ) was used to determine completeness and contamination of the best genomes selected by dRep analysis.…”