We have employed a substrate trapping strategy to identify physiological substrates of the receptor protein-tyrosine phosphatase ␣ (RPTP␣). Here we report that a substrate-trapping mutant of the RPTP␣ membrane proximal catalytic domain (D1), RPTP␣-D1-C433S, specifically bound to tyrosine-phosphorylated proteins from pervanadate-treated cells. The membrane distal catalytic domain of RPTP␣ (D2) and mutants thereof did not bind to tyrosine-phosphorylated proteins. cas is a specific substrate of RPTP␣ in living cells. In conclusion, our results provide evidence that p130cas is a physiological substrate of RPTP␣ in vivo.Protein-tyrosine kinases (PTKs) 1 and protein-tyrosine phosphatases (PTPs) regulate the level of tyrosine phosphorylation of target proteins in cells, thereby regulating many important eukaryotic cell-signaling pathways. PTPs catalyze the hydrolysis of phosphoryl groups on Tyr residues in proteins. Each member of the PTP family contains one or two conserved PTP domains of approximately 240 amino acids including the signature motif (I/V)HCXAGXXR(S/T)G (1). These PTP domains are not only conserved in sequence but also in structure (2-8).The PTP family can be subdivided based on structural differences into receptor-like (RPTP) and cytosolic proteins (9). RPTPs, with CD45 as the founding member (10), consist of an extracellular domain, a single membrane spanning domain, and a cytoplasmic domain. Most RPTPs contain two tandemly repeated PTP domains in their cytoplasmic domain. Interestingly, for all RPTPs with two PTP domains, the majority of the catalytic activity resides within the membrane proximal PTP domain (D1), whereas the membrane distal domain, D2, displays little or no catalytic activity. Inactivation of RPTP␣-D1 or CD45-D1 is sufficient to abolish their biological activities, indicating that PTP activity in D1, but not D2, is essential for the function of RPTPs (11,12). D2s are conserved in sequence and in structure (6, 13), 2 but all D2s lack residues essential for catalysis, suggesting an important role for D2s in processes other than catalysis (6,14,15).To elucidate the function of PTPs in vivo, it is essential to know their natural substrates. To identify substrates of PTPs, "substrate trapping" mutants have been designed. For instance, mutation of the catalytic site Cys to Ala in YopH, a Yersinia PTP, resulted in a mutant that bound substrates but was no longer able to dephosphorylate them, making this an excellent tool for identifying potential substrates (16). Since then, other mutants have been found to bind substrates. For instance, mutation of the highly conserved Asp residue from the "WpD" loop that functions as a general acid to facilitate cleavage of the scissile P-O bond in the substrate generated an efficient substrate-trapping mutant. In fact, for PTP-PEST and PTP1B, these Asp mutants were shown to be even more efficient substrate-trapping mutants than the catalytic site Cys mutants (17,18). By now, substrate-trapping mutants of many non-receptor PTPs have successfully been used ...