2012
DOI: 10.1038/ng.2483
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Genetic variants in STAT4 and HLA-DQ genes confer risk of hepatitis B virus–related hepatocellular carcinoma

Abstract: To identify genetic susceptibility loci for hepatitis B virus (HBV)-related hepatocellular carcinoma (HCC) in the Chinese population, we carried out a genome-wide association study (GWAS) in 2,514 chronic HBV carriers (1,161 HCC cases and 1,353 controls) followed by a 2-stage validation among 6 independent populations of chronic HBV carriers (4,319 cases and 4,966 controls). The joint analyses showed that HCC risk was significantly associated with two independent loci: rs7574865 at STAT4, Pmeta = 2.48 × 10−10,… Show more

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Cited by 264 publications
(289 citation statements)
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“…As described above, the HLA-II genetic polymorphisms are statistically associated with the outcomes of exposureto HBV [18][19][20][21][22][23][24][25][26][27] . This genetic background may predispose immune imbalance upon HBV infection.…”
Section: Interaction Of Genetic Predispositions Of Immune or Inflammamentioning
confidence: 99%
See 1 more Smart Citation
“…As described above, the HLA-II genetic polymorphisms are statistically associated with the outcomes of exposureto HBV [18][19][20][21][22][23][24][25][26][27] . This genetic background may predispose immune imbalance upon HBV infection.…”
Section: Interaction Of Genetic Predispositions Of Immune or Inflammamentioning
confidence: 99%
“…Genome-wide association study in the eastern Asian populations have shown that a total of 11 single nucleotide polymorphisms (SNPs) in genetic loci including HLA-DPA1 and HLA-DPB1, some SNPs in genetic loci including HLA-DQ and -DR, and a locus near HLA-Care significantly associated with CHB [18][19][20][21][22] . Interestingly, these SNPs in the loci encoding human leukocyte antigen-class II (HLA-II) are also significantly associated with vaccine response as well as the risks of acute-on-chronic liver failure, HBVrelated liver cirrhosis, and HBV-associated HCC [23][24][25][26][27] . Interestingly, different human races have different allelic frequencies of SNPs that affect the expression of HLA-DP, HLA-DQ, and the inhibitory component of NF-κB complex IκBa gene NFKBIA.…”
mentioning
confidence: 99%
“…Genetic host factors are known to drive this association, with the identification of single nucleotide polymorphisms (SNPs). SNPs have been identified through genome wide association studies (GWAS): STAT4 (19), TPTE2 (20), CTLA-4 (21) and DCL1 (22) genes, as well as in the region containing the UBEB4, KIF1B and PGD genes (23). Additional SNPs have been described, but it is accepted that these identified SNPs only partially account for the variability in HCC susceptibility.…”
Section: Risk Factorsmentioning
confidence: 99%
“…[67][68][69][70][71] These designs are hard to distinguish driver mutations from passenger mutations because cross-sectional case-control studies can only indicate statistical associations between factors of interest with the diseases. If loss-of-function or gain-of-function mutations can promote carcinogenesis, these mutations are more likely to be driver mutations.…”
Section: -55mentioning
confidence: 99%