Genetic Relationships among Typhula ishikariensis Varieties from Wisconsin

Chang, Sung Ok

doi:10.5660/wts.2015.4.2.135

Cited by 7 publications

(2 citation statements)

References 23 publications

(40 reference statements)

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“…Several economically important species like T. incarnata and T. ishikariensis have been subjected to extensive research on their ecology, physiology and genetics ( e.g. Matsumoto, 1992 , Vergara et al., 2004 , Blunt et al., 2015 , Chang, 2015 , Koch, 2016 ). Generic limits of Typhula are not fully delineated and lack a complete consensus.…”

Section: Introductionmentioning

confidence: 99%

Phylogenetic origins and family classification of typhuloid fungi, with emphasis on Ceratellopsis, Macrotyphula and Typhula (Basidiomycota)

Olariaga

Huhtinen

Læssøe

et al. 2020

Studies in Mycology

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Typhuloid fungi are a very poorly known group of tiny clavarioid homobasidiomycetes. The phylogenetic position and family classification of the genera targeted here, Ceratellopsis , Macrotyphula , Pterula sensu lato and Typhula , are controversial and based on unresolved phylogenies. Our six-gene phylogeny with an expanded taxon sampling shows that typhuloid fungi evolved at least twice in the Agaricales ( Pleurotineae , Clavariineae ) and once in the Hymenochaetales . Macrotyphula , Pterulicium and Typhula are nested within the Pleurotineae . The type of Typhula (1818) and Sclerotium (1790), T. phacorrhiza and S. complanatum (synonym T. phacorrhiza ), are encompassed in the Macrotyphula clade that is distantly related to a monophyletic group formed by species usually assigned to Typhula . Thus, the correct name for Macrotyphula (1972) and Typhula is Sclerotium and all Typhula species but those in the T. phacorrhiza group need to be transferred to Pistillaria (1821). To avoid undesirable nomenclatural changes, we suggest to conserve Typhula with T. incarnata as type. Clavariaceae is supported as a separate, early diverging lineage within Agaricales , with Hygrophoraceae as a successive sister taxon to the rest of the Agaricales . Ceratellopsis s. auct. is polyphyletic because C. acuminata nests in Clavariaceae and C. sagittiformis in the Hymenochaetales . Ceratellopsis is found to be an earlier name for Pterulicium , because the type, C. queletii , represents Pterulicium gracile (synonym Pterula gracilis ), deeply nested in the Pterulicium clade. To avoid re-combining a large number of names in Ceratellopsis we suggest to conserve it with C. acuminata as type. The new genus Bryopistillaria is created to include C. sagittiformis . The families Sarcomyxaceae and Phyllotopsidaceae , and the suborder Clavariineae , are described as new. Six new combinations are proposed and 15 names typified.

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Section: Introductionmentioning

confidence: 99%

Phylogenetic origins and family classification of typhuloid fungi, with emphasis on Ceratellopsis, Macrotyphula and Typhula (Basidiomycota)

Olariaga

Huhtinen

Læssøe

et al. 2020

Studies in Mycology

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“…Typhula are pathogen yeast species that affect grass and cereals (Årsvoll & Smith, 1978). T. ishikariensis is a pathogen fungus, which harms grass and winter cereals in snowy regions, especially plants that stay under snow for a long time (Chang, 2015). This fungus is thought to contaminate the carrots that were used in shalgam production during their storage after the harvest under snow and soil prior to their transfer to markets and factories.…”

Section: Resultsmentioning

confidence: 99%

Next‐generation sequencing of shalgam flavor influencing microflora

Ekici

Kadiroğlu

Ilgaz

2021

Food Processing Preservation

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Shalgam is a fermented sour beverage produced by lactic acid fermentation of black carrots. In this study, some physicochemical analyses and microbial counts of the shalgam samples were analyzed. Dominant lactic acid bacteria (LAB) and yeast-mold species and their composition were determined using next-generation sequencing (NGS) methods and volatile compounds profiles of shalgams were performed during the fermentation process. The total number of bacteria decreased gradually and the number of LAB and yeast increased gradually. The dominant types of LAB in the fermentation process were determined as Leuconostoc mesenteroides, Lactococcus lactis, and Leuconostoc pseudomesenteroides and the dominant yeast species were Saccharomyces cerevisiae and Candida boidinii. Ethyl alcohol was the dominant volatile compound in shalgam. Phenol and 2,4-bis(1,1-dimethylethyl) had lower percentage in total volatile compounds.Novelty impact statement: Microbial profile and flavor changes were analyzed during fermentation in shalgam using real-time PCR and next-generation sequencing methods. Dominant species lactic acid bacteria species in shalgam were L. mesenteroides, L. lactis, and L. pseudomesenteroides and, S. cerevisiae and C. boidinii the dominant yeast species. Terpenes and alcohols were main volatile compounds of shalgam during fermentation. Quality of shalgam is closely related to the microbial flora, mainly LAB, of fermentation. Species determined in this study will be the source to select the starter cultures for future studies and then for industrial usage.

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Weed Control Efficacy and Production of Fruit according to Several Weed Control Methods in an Apple Orchard

장일¹,

강지은²,

김향미³

et al. 2015

Weed & Turfgrass Science

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ABSTRACT. This study was conducted for 3 years in an apple orchard to investigate the efficacy of the glufosinate-ammonium (GFA) SL for weed control in comparison to non-woven fabric mulch, sod culture and machinery cutting treatments. Glufosinateammonium SL 18% was applied with 2 to 3 times, and the extents of injury caused by the different weed control methods were also investigated during the 3 years. The highest level of weed control was obtained by glufosinate-ammonium 3 times spray (98.7%), followed by machinery cutting (95.1%), glufosinate-ammonium 2 times spray (81.5%) and natural sod culture (5.8%). Amounts of fruit production in three times application of glufosinate-ammonium 540 g a.i. ha -1, twice application of GFA, machinery cutting, non-woven fabric processing, sod culture and untreated control were 27.2, 26.2, 25.3, 24.1, 20.4 and 13.3 kg, respectively. There was no toxicity symptom of glufosinate-ammonium on the whole tree such as fruit, bud, trunk, branch and flower during the 3 years.

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Genetic Relationships among Typhula ishikariensis Varieties from Wisconsin

Cited by 7 publications

References 23 publications

Phylogenetic origins and family classification of typhuloid fungi, with emphasis on Ceratellopsis, Macrotyphula and Typhula (Basidiomycota)

Phylogenetic origins and family classification of typhuloid fungi, with emphasis on Ceratellopsis, Macrotyphula and Typhula (Basidiomycota)

Next‐generation sequencing of shalgam flavor influencing microflora

Weed Control Efficacy and Production of Fruit according to Several Weed Control Methods in an Apple Orchard

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