1995
DOI: 10.1016/0014-5793(95)01400-4
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Genes encoding the β1 subunit of voltage‐dependent Na+ channel in rat, mouse and human contain conserved introns

Abstract: We provide evidence in this study that the 86-bp insert in the/$L2 mRNA isoform of the voltage gated sodium channel is an intron. Transcripts still retaining this intron were detected in all tissues where the IBI gene expression was investigated. We also show that the exon/intron boundaries of the last two introns are conserved among rat, mouse and human ~1 gene. Unlike the highly conserved cDNAs, introns in only the rat and mouse genes are highly related. The last intron is very short (86-90 bp) and is locate… Show more

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Cited by 19 publications
(3 citation statements)
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References 31 publications
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“…For reasons that are not understood, the amino acid sequence of the β1B C-terminal domain is species-specific (Patino et al, 2011). Further species-specific alternative splicing events have been discovered within SCN1B , including splice variants of the zebrafish SCN1B ortholog scn1ba , scn1ba_tv1 , and scn1ba_tv2 (Fein et al, 2007) with altered protein structure, and β1.2 in rat with an altered 3′ untranslated region (Dib-Hajj and Waxman, 1995). The tissue-specific expression profiles of each of the β subunits are subtly different, but clearly overlapping (Table 1).…”
Section: Molecular Diversity and Functional Architecturementioning
confidence: 99%
“…For reasons that are not understood, the amino acid sequence of the β1B C-terminal domain is species-specific (Patino et al, 2011). Further species-specific alternative splicing events have been discovered within SCN1B , including splice variants of the zebrafish SCN1B ortholog scn1ba , scn1ba_tv1 , and scn1ba_tv2 (Fein et al, 2007) with altered protein structure, and β1.2 in rat with an altered 3′ untranslated region (Dib-Hajj and Waxman, 1995). The tissue-specific expression profiles of each of the β subunits are subtly different, but clearly overlapping (Table 1).…”
Section: Molecular Diversity and Functional Architecturementioning
confidence: 99%
“…Alternative splicing within exon 5 of the zebrafish SCN1B ortholog scn1ba results in two splice variants, scn1ba_tv1 and scn1ba_tv2 , each with novel C-terminal domains and tissue-specific expression patterns (Fein et al, 2007). In rat, the alternative splice product β1.2 contains a novel 3′ untranslated region generated by retention of intron 5 (Dib-Hajj and Waxman, 1995). Another rat splice variant, β1A, contains a novel transmembrane domain and intracellular C-terminus, encoded by retention of intron 3 (Kazen-Gillespie et al, 2000).…”
Section: Introductionmentioning
confidence: 99%
“…Two intron retention events have been documented in the transcription of mammalian SCN1B genes. The first concerns the retention of intron 5 of rat SCN1B and does not change the coding sequence [30]. The second mechanism involves the retention of intron 3, as reported in both rat and human SCN1B genes [31], [32].…”
Section: Discussionmentioning
confidence: 92%