Recently microfluidic technologies have emerged as viable platforms for nano-volume protein crystallization screening. [1][2][3][4] In particular, screening in nanoliter volume free interface diffusion (FID) reactors has been instrumental in the crystallization of a broad range of targets that had proven to be intractable by conventional screening techniques and has been successfully incorporated into academic and industrial structural biology efforts. 5,6 However, crystals grown in nanoliter volume reactors may be of insufficient size for diffraction studies, and scale-up usually depends on growth kinetics that vary with reactor details. 3,5 Moreover, previously reported microfluidic crystallization devices do not allow the postcrystallization addition of cryoprotectant necessary for diffraction studies at cryogenic temperatures. 11 In this paper, we report a microfluidic device which provides a link between chip-based nanoliter volume crystallization screening and structure analysis through "kinetic optimization" of crystallization reactions and in situ structure determination. Kinetic optimization of mixing rates through systematic variation of reactor geometry and actuation of micromechanical valves is used to screen a large ensemble of kinetic trajectories that are not practical with conventional techniques. Using this device, we demonstrate control over crystal quality, reliable scale-up from nanoliter volume reactions, facile harvesting and cryoprotectant screening, and protein structure determination at atomic resolution from data collected inchip.The basic structure of the kinetic optimization device implements five parallel, FID reaction chambers 7 encased beneath a semipermeable membrane at the bottom of a macroscopic fluid reservoir. The FID reactors equilibrate not only with themselves via diffusion but also with reservoir solutions through the membrane, which defines an osmotic bath that controls both the rate and extent of vapor transport to and from the reactors. The combined FID-vapor diffusion motif (Figure 1) is repeated 20 times on the chip; each version has different channel lengths and volumes. The device has channel lengths ranging from 300 to 2400 µm, thereby allowing the characteristic mixing time to be varied by a factor of 8. 7 The present device further allows control over the rate and extent of water vapor transport through the permeable poly(dimethylsiloxane) (PDMS) membrane. 8 The extent of dehydration can be directly regulated by filling the wells overlaying each reaction site with a solution of well-defined vapor pressure and sealed with clear adhesive tape. Over the course of FID-driven crystallization, water in the well solution passes through the membrane by vapor diffusion, equilibrating with the contents of the reactor until the osmotic potentials of both solutions match. In a second approach, the dehydration rates of the FID reactors were controlled by dispensing semipermeable fluorinated oil (poly-3,3,3-trifluoropropylmethylsiloxane; Hampton Research) into each reservoir, ...