Thylakoids isolated from leaves of winter rye (Secale cereale L. cv Puma) grown at either 20 or 5°C were extracted with the nonionic detergents Triton X-100 and octyl glucoside. Less total chlorophyll was extracted from 5°C thylakoids by these detergents under all conditions, including pretreatment with cations. Thylakoids from either 20 or 5°C leaves were solubilized in 0.7% Triton X-100 and centrifuged on sucrose gradients to purify the light harvesting complex (LHCII). Greater yields of LHCII were obtained by cation precipitation of particles derived from 20°C thylakoids than from 5°C thylakoids. When 20 and 5°C thylakoids were phosphorylated and completely solubilized in sodium dodecyl sulfate, no differences were observed in the 32Pi-labeling characteristics of the membrane polypeptides. However, when phosphorylated thylakoids were extracted with octyl glucoside, extraction of LHCII associated with the 5°C thylakoids was markedly reduced in comparison with the extraction of LHCII from 20°C membranes. Since 20 and 5°C thylakoids exhibited significant differences in the Chl content and Chl a/b ratios of membrane fractions produced after solubilization with either Triton X-100 or octyl glucoside, and since few differences between the proteins of the two membranes could be observed following complete denaturation in sodium dodecyl sulfate, we conclude that the integral structure of the thylakoid membrane is affected during rye leaf development at low temperature.The ability of winter rye plants to photosynthesize efficiently at low temperatures is dependent on plant growth and development at low temperature (20). When Puma rye is grown at temperatures near freezing (2-5°C), leaves develop which are morphologically, anatomically and functionally distinct from leaves produced by plants grown at warmer temperatures (20C). These low temperature leaves have shorter blades, fewer stomates, thickened epidermal cell walls, increased epicuticular wax deposits and larger, multivacuolate mesophyll cells (9,12,17,18 5C (11, 18). No changes have been observed in Chl a/b, protein/Chl, Chl/P700 or PSII photosynthetic unit size (8,10,11,18) between the two membranes.In the absence ofdramatic changes in membrane composition, it was hypothesized that structural modifications of thylakoid membranes might account for the increased electron transport capacity which arises during the development oflow temperature leaves. Ultrastructural analyses of chloroplasts isolated from low temperature leaves show that they have the same number of granal stacks, although the grana tend to be smaller in size, than those of chloroplasts developed at warmer temperatures (18). Both sets of plastids exhibit similar particle densities on the exoplasmic and protoplasmic freeze-fracture faces of the thylakoids; however, the particle size distributions are significantly different on both fracture faces (18). Other modifications of rye membranes were revealed by SDS-PAGE of Chl-protein complexes extracted from thylakoids (8). For example, when 5...