2011
DOI: 10.1002/pmic.201190117
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Enabling BioSharing – a report on the Annual Spring Workshop of the HUPO‐PSI April 11–13, 2011, EMBL‐Heidelberg, Germany

Abstract: The Annual Spring workshop of the HUPO‐PSI was this year held at the EMBL International Centre for Advanced Training (EICAT) in Heidelberg, Germany. Delegates briefly reviewed the successes of the group to date. These include the wide spread implementation of the molecular interaction data exchange formats, PSI‐MI XML2.5 and MITAB, and also of mzML, the standard output format for mass spectrometer output data. These successes have resulted in enhanced accessibility to published data, for example the developmen… Show more

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Cited by 7 publications
(5 citation statements)
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“…The mzQuantML model was developed over several years at dedicated workshops, annual PSI meetings (1214), and regular conference calls between contributors around the world. The primary use cases and guiding principles for the development of mzQuantML are as follows (these are edited extracts from the formal specification document).…”
Section: Methodsmentioning
confidence: 99%
“…The mzQuantML model was developed over several years at dedicated workshops, annual PSI meetings (1214), and regular conference calls between contributors around the world. The primary use cases and guiding principles for the development of mzQuantML are as follows (these are edited extracts from the formal specification document).…”
Section: Methodsmentioning
confidence: 99%
“…BioSharing.org is a global initiative to co-ordinate the standardization of biological data in order to promote data sharing and interoperation [19,20]. This organization catalogues reporting standards (formats, terminologies and checklists), as well as developing data sharing policies.…”
Section: A Biosharingmentioning
confidence: 99%
“…From its foundation in 2002, PSI has held annual meetings, as well as more frequent workshops, that have contributed to numerous improvements in data sharing [7][8][9][10][11][12][13][14][15][16][17][18][19][20][21][22][23]. The main organizational units of the PSI are the workgroups: molecular interactions, MS, proteomics informatics, protein modifications (MOD), and protein separation.…”
Section: Introductionmentioning
confidence: 99%