This contribution reports the molecular-level conformations
of
the backbone and side chains of thermosensitive bottlebrush polymers
(BBPs) of poly(N-isopropylacrylamide) (PNIPAM) in
water. Here, for the first time, realistic coarse-grained (CG) models
of PNIPAM and explicit water that can accurately capture its lower
critical solution temperature (LCST) were employed. The effect of
PNIPAM grafting density, side-chain length, and hydrophobic backbone
length was studied by performing simulations at 290 and 320 K. These
are below and above the LCST of PNIPAM, respectively. BBPs with 12
(grafting density, ∼16%), 24 (∼33%), 36 (∼50%),
and 72 (∼100%) chains of 30, 18, 10, and 5 monomers of PNIPAM
on the backbone with 72 beads were generated. For BBPs with 30-mer
and 18-mer PNIPAM chains, they show that they are in a coil-like and
a globule-like state below and above their LCST, respectively, up
to 50% grafting density. At 100% grafting density, majority of PNIPAM
chains are collapsed both below and above LCST due to their dehydration.
For BBPs with 5-mer and 10-mer of PNIPAM, they behave like an elastic
rod both below and above LCST. The backbone attains coiled-coil conformation
with an increase in the grafting density in all the systems. The metric
multidimensional scaling (MDS) method was utilized to analyze conformations
of the backbone of the BBPs, and it shows that the backbone of BBPs
with lower grafting densities exhibits more numbers of metastable
states and explores more conformational spaces as compared to higher
grafting densities. MDS analysis also shows that BBPs with 5-mer side
chains for lower grafting density exhibit more metastable states as
compared to those with 30-mer side chains. The BBPs with 9, 36, and
72 bead backbones suggest that, with a decrease in the backbone length,
even at 100% grafting density, PNIPAM chains exhibit a coil-like and
a globule-like state at 290 and 320 K, respectively. The MDS analysis
shows that, with an increase in the backbone length, the number of
metastable states increases. The knowledge gained from this study
can be useful for experimental scientists in controlling the conformations
of the backbone and individual side chains of thermosensitive BBPs,
which are responsible for their properties and function.