2017
DOI: 10.1016/j.actbio.2016.12.023
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Defining the hierarchical organisation of collagen VI microfibrils at nanometre to micrometre length scales

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Cited by 33 publications
(32 citation statements)
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“…Splice-modulating antisense oligomers targeting the pseudoexon pre-mRNA sequence are used to promote its skipping as a therapeutic strategy. (E) Splicing reporter (minigene) constructs were prepared by subcloning various segments of COL6A1 genomic DNA (intervening sequence 11 , exons 11 to 13 [Ex- [11][12][13], or exons 10 to 13 [Ex-10-13]) into the pET01 vector (top). Minigenes were transfected into HEK293T cells, and RNA was isolated 24 hours later.…”
Section: Resultsmentioning
confidence: 99%
See 1 more Smart Citation
“…Splice-modulating antisense oligomers targeting the pseudoexon pre-mRNA sequence are used to promote its skipping as a therapeutic strategy. (E) Splicing reporter (minigene) constructs were prepared by subcloning various segments of COL6A1 genomic DNA (intervening sequence 11 , exons 11 to 13 [Ex- [11][12][13], or exons 10 to 13 [Ex-10-13]) into the pET01 vector (top). Minigenes were transfected into HEK293T cells, and RNA was isolated 24 hours later.…”
Section: Resultsmentioning
confidence: 99%
“…Monomers join laterally to form staggered antiparallel dimers, which then associate in parallel to form a 112-nm-long tetramer. The tetramers are subsequently secreted into the extracellular space where they form higher-order structures by end-to-end association and branching (9)(10)(11)(12)(13)(14). Functional collagen VI is a connected meshwork of tetramers, ultrastructurally appearing as beaded microfibrils (15).…”
Section: Introductionmentioning
confidence: 99%
“…WT and homozygous eyes were prepared for serial block face scanning electron microscopy (SBF-SEM) as previously described ( 43 , 44 ). Eyes were oriented so the CZ to lens capsule was imaged in longitudinal cross section.…”
Section: Methodsmentioning
confidence: 99%
“…The initial template was an average image of the unaligned stack of particles. An initial 3D model was constructed by creating a cylindrical average model from the sum average of the aligned particle set, using SPIDER, filtered to 20 Å; this was subsequently refined using a projection matching approach as we described for collagen VI microfibrils [49] . To evaluate the reconstructions, projections were compared non-quantitatively to class sum images created with a non-reference based classification method using IMAGIC5 [50] .…”
Section: Methodsmentioning
confidence: 99%